Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_B24
(833 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 122 2e-27
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 122 2e-27
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 122 2e-27
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 122 2e-27
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 122 2e-27
Y08265-1|CAA69591.1| 469|Homo sapiens DAN26 protein. 53 1e-06
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 53 1e-06
BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein. 37 0.078
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 37 0.078
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 37 0.078
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 36 0.14
BC024041-1|AAH24041.1| 547|Homo sapiens SFRS8 protein protein. 36 0.14
BC015953-1|AAH15953.1| 760|Homo sapiens SFRS8 protein protein. 36 0.14
BC008707-1|AAH08707.1| 760|Homo sapiens SFRS8 protein protein. 36 0.14
AB208921-1|BAD92158.1| 636|Homo sapiens SFRS8 protein variant p... 36 0.14
BC142988-1|AAI42989.1| 645|Homo sapiens splicing factor 4 protein. 36 0.24
BC063784-1|AAH63784.1| 643|Homo sapiens SF4 protein protein. 36 0.24
AY072917-1|AAL68961.1| 641|Homo sapiens RNA-binding protein spl... 36 0.24
AL713757-1|CAD28528.1| 392|Homo sapiens hypothetical protein pr... 36 0.24
AL137286-1|CAB70678.1| 392|Homo sapiens hypothetical protein pr... 36 0.24
AF521128-1|AAN77123.1| 645|Homo sapiens splicing factor 4 protein. 36 0.24
AC004475-1|AAC08052.1| 608|Homo sapiens F23858_1 protein. 36 0.24
BC032672-1|AAH32672.1| 273|Homo sapiens HVCN1 protein protein. 31 3.9
BC009731-1|AAH09731.1| 273|Homo sapiens hydrogen voltage-gated ... 31 3.9
AY359054-1|AAQ89413.1| 255|Homo sapiens ATWD578 protein. 31 3.9
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 122 bits (294), Expect = 2e-27
Identities = 69/143 (48%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Frame = +3
Query: 312 DPYHAYYQHKVREIKEGKVPEPTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXX 485
DPYHAYY+HKV E KEGK EP+A P M QQ T + + ++
Sbjct: 88 DPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETI 141
Query: 486 XXXXXXXDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMXKXERXXXFXFLRPX 665
+FEFIADPPSISA +LD+VKLTAQFVARNGRQFLT LM K +R F FLRP
Sbjct: 142 VPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQ 201
Query: 666 XFLCPNXSRVXXXN*XKVLLPPK 734
L +++ K+L+PPK
Sbjct: 202 HSLFNYFTKLVEQY-TKILIPPK 223
Score = 77.8 bits (183), Expect = 5e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLN 304
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLN 85
Score = 36.3 bits (80), Expect = 0.14
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 200 NIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGSL 319
++V TA FVARNG +F ++ Q E N +F+FL SL
Sbjct: 165 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSL 204
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 122 bits (294), Expect = 2e-27
Identities = 69/143 (48%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Frame = +3
Query: 312 DPYHAYYQHKVREIKEGKVPEPTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXX 485
DPYHAYY+HKV E KEGK EP+A P M QQ T + + ++
Sbjct: 88 DPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETI 141
Query: 486 XXXXXXXDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMXKXERXXXFXFLRPX 665
+FEFIADPPSISA +LD+VKLTAQFVARNGRQFLT LM K +R F FLRP
Sbjct: 142 VPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQ 201
Query: 666 XFLCPNXSRVXXXN*XKVLLPPK 734
L +++ K+L+PPK
Sbjct: 202 HSLFNYFTKLVEQY-TKILIPPK 223
Score = 77.8 bits (183), Expect = 5e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLN 304
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLN 85
Score = 36.3 bits (80), Expect = 0.14
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 200 NIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGSL 319
++V TA FVARNG +F ++ Q E N +F+FL SL
Sbjct: 165 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSL 204
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 122 bits (294), Expect = 2e-27
Identities = 69/143 (48%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Frame = +3
Query: 312 DPYHAYYQHKVREIKEGKVPEPTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXX 485
DPYHAYY+HKV E KEGK EP+A P M QQ T + + ++
Sbjct: 88 DPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETI 141
Query: 486 XXXXXXXDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMXKXERXXXFXFLRPX 665
+FEFIADPPSISA +LD+VKLTAQFVARNGRQFLT LM K +R F FLRP
Sbjct: 142 VPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQ 201
Query: 666 XFLCPNXSRVXXXN*XKVLLPPK 734
L +++ K+L+PPK
Sbjct: 202 HSLFNYFTKLVEQY-TKILIPPK 223
Score = 77.8 bits (183), Expect = 5e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLN 304
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLN 85
Score = 36.3 bits (80), Expect = 0.14
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 200 NIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGSL 319
++V TA FVARNG +F ++ Q E N +F+FL SL
Sbjct: 165 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSL 204
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 122 bits (294), Expect = 2e-27
Identities = 69/143 (48%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Frame = +3
Query: 312 DPYHAYYQHKVREIKEGKVPEPTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXX 485
DPYHAYY+HKV E KEGK EP+A P M QQ T + + ++
Sbjct: 88 DPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETI 141
Query: 486 XXXXXXXDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMXKXERXXXFXFLRPX 665
+FEFIADPPSISA +LD+VKLTAQFVARNGRQFLT LM K +R F FLRP
Sbjct: 142 VPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQ 201
Query: 666 XFLCPNXSRVXXXN*XKVLLPPK 734
L +++ K+L+PPK
Sbjct: 202 HSLFNYFTKLVEQY-TKILIPPK 223
Score = 77.8 bits (183), Expect = 5e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLN 304
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLN 85
Score = 36.3 bits (80), Expect = 0.14
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 200 NIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGSL 319
++V TA FVARNG +F ++ Q E N +F+FL SL
Sbjct: 165 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSL 204
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 122 bits (294), Expect = 2e-27
Identities = 69/143 (48%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Frame = +3
Query: 312 DPYHAYYQHKVREIKEGKVPEPTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXX 485
DPYHAYY+HKV E KEGK EP+A P M QQ T + + ++
Sbjct: 88 DPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETI 141
Query: 486 XXXXXXXDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMXKXERXXXFXFLRPX 665
+FEFIADPPSISA +LD+VKLTAQFVARNGRQFLT LM K +R F FLRP
Sbjct: 142 VPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQ 201
Query: 666 XFLCPNXSRVXXXN*XKVLLPPK 734
L +++ K+L+PPK
Sbjct: 202 HSLFNYFTKLVEQY-TKILIPPK 223
Score = 77.8 bits (183), Expect = 5e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLN 304
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLN 85
Score = 36.3 bits (80), Expect = 0.14
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 200 NIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGSL 319
++V TA FVARNG +F ++ Q E N +F+FL SL
Sbjct: 165 DVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSL 204
>Y08265-1|CAA69591.1| 469|Homo sapiens DAN26 protein.
Length = 469
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSG 310
+RN++DK A FVARNGPEFE + + NPKF+FL G
Sbjct: 22 LRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGG 60
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSG 310
+RN++DK A FVARNGPEFE + + NPKF+FL G
Sbjct: 12 LRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGG 50
>BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein.
Length = 620
Score = 37.1 bits (82), Expect = 0.078
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
++ + FV R GP FEA I E+ NP F FL
Sbjct: 21 LIHRMIEFVVREGPMFEAMIMNREINNPMFRFL 53
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 37.1 bits (82), Expect = 0.078
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
++ + FV R GP FEA I E+ NP F FL
Sbjct: 428 LIHRMIEFVVREGPMFEAMIMNREINNPMFRFL 460
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 37.1 bits (82), Expect = 0.078
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
++ + FV R GP FEA I E+ NP F FL
Sbjct: 429 LIHRMIEFVVREGPMFEAMIMNREINNPMFRFL 461
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator
suppressor-of-white-apricot mRNA, complete cds. ).
Length = 951
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
I+++TASFV R G +FE ++ + N +F+FL
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQAPNSQFDFL 243
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+ ++DK A +VARNG +FE +R + +F FL
Sbjct: 456 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFL 489
>BC024041-1|AAH24041.1| 547|Homo sapiens SFRS8 protein protein.
Length = 547
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
I+++TASFV R G +FE ++ + N +F+FL
Sbjct: 148 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFL 180
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+ ++DK A +VARNG +FE +R + +F FL
Sbjct: 393 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFL 426
>BC015953-1|AAH15953.1| 760|Homo sapiens SFRS8 protein protein.
Length = 760
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
I+++TASFV R G +FE ++ + N +F+FL
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFL 243
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+ ++DK A +VARNG +FE +R + +F FL
Sbjct: 456 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFL 489
>BC008707-1|AAH08707.1| 760|Homo sapiens SFRS8 protein protein.
Length = 760
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
I+++TASFV R G +FE ++ + N +F+FL
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFL 243
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+ ++DK A +VARNG +FE +R + +F FL
Sbjct: 456 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFL 489
>AB208921-1|BAD92158.1| 636|Homo sapiens SFRS8 protein variant
protein.
Length = 636
Score = 36.3 bits (80), Expect = 0.14
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 203 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
I+++TASFV R G +FE ++ + N +F+FL
Sbjct: 95 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFL 127
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+ ++DK A +VARNG +FE +R + +F FL
Sbjct: 340 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFL 373
>BC142988-1|AAI42989.1| 645|Homo sapiens splicing factor 4 protein.
Length = 645
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 197 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGS 316
R +++K A FVA GPE E ++ NP F FL+ S
Sbjct: 189 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNS 228
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+N+ +K A F+A GPE E QN N F+FL
Sbjct: 263 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFL 298
>BC063784-1|AAH63784.1| 643|Homo sapiens SF4 protein protein.
Length = 643
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 197 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGS 316
R +++K A FVA GPE E ++ NP F FL+ S
Sbjct: 187 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNS 226
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+N+ +K A F+A GPE E QN N F+FL
Sbjct: 261 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFL 296
>AY072917-1|AAL68961.1| 641|Homo sapiens RNA-binding protein splice
variant a protein.
Length = 641
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 197 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGS 316
R +++K A FVA GPE E ++ NP F FL+ S
Sbjct: 185 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNS 224
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+N+ +K A F+A GPE E QN N F+FL
Sbjct: 259 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFL 294
>AL713757-1|CAD28528.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+N+ +K A F+A GPE E QN N F+FL
Sbjct: 10 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFL 45
>AL137286-1|CAB70678.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+N+ +K A F+A GPE E QN N F+FL
Sbjct: 10 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFL 45
>AF521128-1|AAN77123.1| 645|Homo sapiens splicing factor 4 protein.
Length = 645
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 197 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGS 316
R +++K A FVA GPE E ++ NP F FL+ S
Sbjct: 189 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNS 228
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+N+ +K A F+A GPE E QN N F+FL
Sbjct: 263 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFL 298
>AC004475-1|AAC08052.1| 608|Homo sapiens F23858_1 protein.
Length = 608
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 197 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGGS 316
R +++K A FVA GPE E ++ NP F FL+ S
Sbjct: 152 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNS 191
Score = 35.5 bits (78), Expect = 0.24
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 194 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL 301
V+N+ +K A F+A GPE E QN N F+FL
Sbjct: 226 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFL 261
>BC032672-1|AAH32672.1| 273|Homo sapiens HVCN1 protein protein.
Length = 273
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 261 SDRMSWATQSSTSLIQGDPYHAY-YQHKVREIKEGKVPEPTAPPTMPSGQQRMGLAPATA 437
++RMS + T + GD YHA+ +K E +E + E PPT SG++ AP A
Sbjct: 18 AERMSKFLRHFT--VVGDDYHAWNINYKKWENEEEEEEEEQPPPTPVSGEEGRAAAPDVA 75
>BC009731-1|AAH09731.1| 273|Homo sapiens hydrogen voltage-gated
channel 1 protein.
Length = 273
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 261 SDRMSWATQSSTSLIQGDPYHAY-YQHKVREIKEGKVPEPTAPPTMPSGQQRMGLAPATA 437
++RMS + T + GD YHA+ +K E +E + E PPT SG++ AP A
Sbjct: 18 AERMSKFLRHFT--VVGDDYHAWNINYKKWENEEEEEEEEQPPPTPVSGEEGRAAAPDVA 75
>AY359054-1|AAQ89413.1| 255|Homo sapiens ATWD578 protein.
Length = 255
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 261 SDRMSWATQSSTSLIQGDPYHAY-YQHKVREIKEGKVPEPTAPPTMPSGQQRMGLAPATA 437
++RMS + T + GD YHA+ +K E +E + E PPT SG++ AP A
Sbjct: 18 AERMSKFLRHFT--VVGDDYHAWNINYKKWENEEEEEEEEQPPPTPVSGEEGRAAAPDVA 75
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,218,886
Number of Sequences: 237096
Number of extensions: 1949133
Number of successful extensions: 6201
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6191
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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