Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_B22
         (825 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0266 - 21936234-21936282,21936771-21937033                       31   1.1  
01_01_0796 + 6190931-6192745                                           25   1.4  
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    31   1.5  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    25   3.8  
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609...    29   4.5  
06_03_0082 + 16363742-16364632                                         29   4.5  
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343...    29   5.9  
08_01_0805 - 7776999-7777241,7777365-7777499                           29   5.9  
04_04_0009 + 22134160-22134696                                         29   5.9  

>09_06_0266 - 21936234-21936282,21936771-21937033
          Length = 103

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -2

Query: 398 GGXFXXGGGXXPPPPPP 348
           G  F  GGG  PPPPPP
Sbjct: 16  GACFQAGGGRRPPPPPP 32


>01_01_0796 + 6190931-6192745
          Length = 604

 Score = 25.0 bits (52), Expect(2) = 1.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 365 PPPPPPXXGG 336
           PPPPPP  GG
Sbjct: 238 PPPPPPAAGG 247



 Score = 24.2 bits (50), Expect(2) = 1.4
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 398 GGXFXXGGGXXPPPPPP 348
           GG     G   PPPPPP
Sbjct: 182 GGKRPIQGSSVPPPPPP 198



 Score = 23.8 bits (49), Expect(2) = 8.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -2

Query: 401 GGGXFXXGGGXXPPPPPP 348
           GG     G    PPPPPP
Sbjct: 182 GGKRPIQGSSVPPPPPPP 199



 Score = 22.6 bits (46), Expect(2) = 8.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -2

Query: 365 PPPPPPXXGG 336
           PPPPPP   G
Sbjct: 237 PPPPPPPAAG 246


>07_03_1691 -
           28726307-28726323,28726588-28726953,28727483-28727567,
           28728255-28728387,28729793-28730328
          Length = 378

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 340 PXXGGGGGGXXPPPX*XXPPP 402
           P  GGGGGG  P P    PPP
Sbjct: 31  PSCGGGGGGAGPTPPPPPPPP 51


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 25.0 bits (52), Expect(2) = 3.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -2

Query: 377 GGXXPPPPPP 348
           GG  PPPPPP
Sbjct: 939 GGPPPPPPPP 948



 Score = 22.6 bits (46), Expect(2) = 3.8
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 365 PPPPPPXXG 339
           PPPPPP  G
Sbjct: 941 PPPPPPPPG 949


>07_03_1140 -
           24258627-24258849,24259967-24260089,24260200-24260921,
           24260945-24261073,24261484-24261714
          Length = 475

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 380 GGGXXPPPPPPXXG 339
           GGG  PPPPPP  G
Sbjct: 55  GGGGWPPPPPPLSG 68


>06_03_0082 + 16363742-16364632
          Length = 296

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -2

Query: 401 GGGXFXXGGGXXPPPPPP 348
           GGG    GG   PPPPPP
Sbjct: 157 GGGDQFGGGEERPPPPPP 174


>10_08_0451 +
           18033065-18033253,18033746-18033805,18034256-18034324,
           18034751-18034786,18035081-18035146,18035345-18035443,
           18035543-18035620,18035724-18035802,18035999-18036093,
           18036251-18036335,18036505-18036698,18036804-18036922,
           18037015-18037057
          Length = 403

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +1

Query: 349 GGGGGGXXPPPX*XXPPP 402
           GGGGGG   PP    PPP
Sbjct: 23  GGGGGGMGSPPLGPPPPP 40


>08_01_0805 - 7776999-7777241,7777365-7777499
          Length = 125

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2

Query: 380 GGGXXPPPPPPXXGG 336
           GG   PPPPPP  GG
Sbjct: 106 GGDSPPPPPPPAAGG 120


>04_04_0009 + 22134160-22134696
          Length = 178

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -2

Query: 401 GGGXFXXGGGXXPPPPPPXXGG 336
           G G    GG   PPPPPP   G
Sbjct: 52  GRGKACGGGSTAPPPPPPSSSG 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,327,225
Number of Sequences: 37544
Number of extensions: 249003
Number of successful extensions: 4467
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3612
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)