Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_B19
         (789 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U59151-1|AAB94299.1|  514|Homo sapiens Cbf5p homolog protein.         203   5e-52
BC010015-1|AAH10015.1|  514|Homo sapiens dyskeratosis congenita ...   203   5e-52
BC009928-1|AAH09928.1|  514|Homo sapiens dyskeratosis congenita ...   203   5e-52
AJ224481-1|CAA11970.1|  514|Homo sapiens dyskerin protein.            203   5e-52
AJ010395-1|CAB51168.1|  524|Homo sapiens dyskerin protein.            203   5e-52
AF067023-1|AAD20232.1|  514|Homo sapiens dyskerin protein.            203   5e-52
AF067008-1|AAD11815.1|  514|Homo sapiens dyskerin protein.            203   5e-52
BC030601-1|AAH30601.1|  349|Homo sapiens TruB pseudouridine (psi...    36   0.17 
AL355340-1|CAH73219.1|  349|Homo sapiens TruB pseudouridine (psi...    36   0.17 
AK223567-1|BAD97287.1|  349|Homo sapiens TruB pseudouridine (psi...    36   0.17 
AF448144-1|AAL40350.1|  349|Homo sapiens TruB pseudouridine synt...    36   0.17 

>U59151-1|AAB94299.1|  514|Homo sapiens Cbf5p homolog protein.
          Length = 514

 Score =  203 bits (496), Expect = 5e-52
 Identities = 100/176 (56%), Positives = 126/176 (71%)
 Frame = +1

Query: 19  VEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAGFQLAFSRREYSKSHTGXW 198
           VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV   +L  +    ++      
Sbjct: 115 VEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALE 174

Query: 199 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHL 378
                L+ R P LI+AVKRQLRVRT+Y+SK++++D ++ +G+FWVSCEAG+YIRT+CVHL
Sbjct: 175 TLTGALFQRPP-LIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHL 233

Query: 379 GLMLGVXXXMIELXXXRSGIXGXKEGMVXMHDILXAXXSYENXXXXTYLXXXXXPL 546
           GL+LGV   M EL   RSG+   K+ MV MHD+L A   Y+N    +YL     PL
Sbjct: 234 GLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPL 289


>BC010015-1|AAH10015.1|  514|Homo sapiens dyskeratosis congenita 1,
           dyskerin protein.
          Length = 514

 Score =  203 bits (496), Expect = 5e-52
 Identities = 100/176 (56%), Positives = 126/176 (71%)
 Frame = +1

Query: 19  VEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAGFQLAFSRREYSKSHTGXW 198
           VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV   +L  +    ++      
Sbjct: 115 VEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALE 174

Query: 199 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHL 378
                L+ R P LI+AVKRQLRVRT+Y+SK++++D ++ +G+FWVSCEAG+YIRT+CVHL
Sbjct: 175 TLTGALFQRPP-LIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHL 233

Query: 379 GLMLGVXXXMIELXXXRSGIXGXKEGMVXMHDILXAXXSYENXXXXTYLXXXXXPL 546
           GL+LGV   M EL   RSG+   K+ MV MHD+L A   Y+N    +YL     PL
Sbjct: 234 GLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPL 289


>BC009928-1|AAH09928.1|  514|Homo sapiens dyskeratosis congenita 1,
           dyskerin protein.
          Length = 514

 Score =  203 bits (496), Expect = 5e-52
 Identities = 100/176 (56%), Positives = 126/176 (71%)
 Frame = +1

Query: 19  VEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAGFQLAFSRREYSKSHTGXW 198
           VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV   +L  +    ++      
Sbjct: 115 VEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALE 174

Query: 199 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHL 378
                L+ R P LI+AVKRQLRVRT+Y+SK++++D ++ +G+FWVSCEAG+YIRT+CVHL
Sbjct: 175 TLTGALFQRPP-LIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHL 233

Query: 379 GLMLGVXXXMIELXXXRSGIXGXKEGMVXMHDILXAXXSYENXXXXTYLXXXXXPL 546
           GL+LGV   M EL   RSG+   K+ MV MHD+L A   Y+N    +YL     PL
Sbjct: 234 GLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRFVYPL 289


>AJ224481-1|CAA11970.1|  514|Homo sapiens dyskerin protein.
          Length = 514

 Score =  203 bits (496), Expect = 5e-52
 Identities = 100/176 (56%), Positives = 126/176 (71%)
 Frame = +1

Query: 19  VEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAGFQLAFSRREYSKSHTGXW 198
           VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV   +L  +    ++      
Sbjct: 115 VEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALE 174

Query: 199 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHL 378
                L+ R P LI+AVKRQLRVRT+Y+SK++++D ++ +G+FWVSCEAG+YIRT+CVHL
Sbjct: 175 TLTGALFQRPP-LIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHL 233

Query: 379 GLMLGVXXXMIELXXXRSGIXGXKEGMVXMHDILXAXXSYENXXXXTYLXXXXXPL 546
           GL+LGV   M EL   RSG+   K+ MV MHD+L A   Y+N    +YL     PL
Sbjct: 234 GLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPL 289


>AJ010395-1|CAB51168.1|  524|Homo sapiens dyskerin protein.
          Length = 524

 Score =  203 bits (496), Expect = 5e-52
 Identities = 100/176 (56%), Positives = 126/176 (71%)
 Frame = +1

Query: 19  VEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAGFQLAFSRREYSKSHTGXW 198
           VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV   +L  +    ++      
Sbjct: 115 VEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALE 174

Query: 199 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHL 378
                L+ R P LI+AVKRQLRVRT+Y+SK++++D ++ +G+FWVSCEAG+YIRT+CVHL
Sbjct: 175 TLTGALFQRPP-LIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHL 233

Query: 379 GLMLGVXXXMIELXXXRSGIXGXKEGMVXMHDILXAXXSYENXXXXTYLXXXXXPL 546
           GL+LGV   M EL   RSG+   K+ MV MHD+L A   Y+N    +YL     PL
Sbjct: 234 GLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPL 289


>AF067023-1|AAD20232.1|  514|Homo sapiens dyskerin protein.
          Length = 514

 Score =  203 bits (496), Expect = 5e-52
 Identities = 100/176 (56%), Positives = 126/176 (71%)
 Frame = +1

Query: 19  VEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAGFQLAFSRREYSKSHTGXW 198
           VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV   +L  +    ++      
Sbjct: 115 VEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALE 174

Query: 199 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHL 378
                L+ R P LI+AVKRQLRVRT+Y+SK++++D ++ +G+FWVSCEAG+YIRT+CVHL
Sbjct: 175 TLTGALFQRPP-LIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHL 233

Query: 379 GLMLGVXXXMIELXXXRSGIXGXKEGMVXMHDILXAXXSYENXXXXTYLXXXXXPL 546
           GL+LGV   M EL   RSG+   K+ MV MHD+L A   Y+N    +YL     PL
Sbjct: 234 GLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPL 289


>AF067008-1|AAD11815.1|  514|Homo sapiens dyskerin protein.
          Length = 514

 Score =  203 bits (496), Expect = 5e-52
 Identities = 100/176 (56%), Positives = 126/176 (71%)
 Frame = +1

Query: 19  VEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVAGFQLAFSRREYSKSHTGXW 198
           VEKTGHSGTLDPKVTGCLIVCI+RATRLVKSQQ+AGKEYV   +L  +    ++      
Sbjct: 115 VEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIEGGTQLSRALE 174

Query: 199 RSCVELYSRGPRLISAVKRQLRVRTVYDSKLLDFDQDKNIGVFWVSCEAGSYIRTMCVHL 378
                L+ R P LI+AVKRQLRVRT+Y+SK++++D ++ +G+FWVSCEAG+YIRT+CVHL
Sbjct: 175 TLTGALFQRPP-LIAAVKRQLRVRTIYESKMIEYDPERRLGIFWVSCEAGTYIRTLCVHL 233

Query: 379 GLMLGVXXXMIELXXXRSGIXGXKEGMVXMHDILXAXXSYENXXXXTYLXXXXXPL 546
           GL+LGV   M EL   RSG+   K+ MV MHD+L A   Y+N    +YL     PL
Sbjct: 234 GLLLGVGGQMQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPL 289


>BC030601-1|AAH30601.1|  349|Homo sapiens TruB pseudouridine (psi)
           synthase homolog 1 (E. coli) protein.
          Length = 349

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 25  KTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVA 141
           K GH GTLD    G L+V I   T+++ S  +  K Y A
Sbjct: 113 KIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTA 151


>AL355340-1|CAH73219.1|  349|Homo sapiens TruB pseudouridine (psi)
           synthase homolog 1 (E. coli) protein.
          Length = 349

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 25  KTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVA 141
           K GH GTLD    G L+V I   T+++ S  +  K Y A
Sbjct: 113 KIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTA 151


>AK223567-1|BAD97287.1|  349|Homo sapiens TruB pseudouridine (psi)
           synthase homolog 1 variant protein.
          Length = 349

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 25  KTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVA 141
           K GH GTLD    G L+V I   T+++ S  +  K Y A
Sbjct: 113 KIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTA 151


>AF448144-1|AAL40350.1|  349|Homo sapiens TruB pseudouridine
           synthase-like protein 1 protein.
          Length = 349

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 25  KTGHSGTLDPKVTGCLIVCIDRATRLVKSQQNAGKEYVA 141
           K GH GTLD    G L+V I   T+++ S  +  K Y A
Sbjct: 113 KIGHGGTLDSAARGVLVVGIGSGTKMLTSMLSGSKRYTA 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,059,126
Number of Sequences: 237096
Number of extensions: 1569507
Number of successful extensions: 3127
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3113
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)