Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_B19
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   4.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   7.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   7.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   7.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   9.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   9.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.9  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 217 RAPRSFSKXLCDFLNILYG*MQVENRLHTL 128
           +A +SFS   C+ + +  G +++  R HTL
Sbjct: 12  QAKKSFSCKYCEKVYVSLGALKMHIRTHTL 41


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 181 SHTGXWRSCVELYSR 225
           +++G WR CV + SR
Sbjct: 99  TYSGLWRVCVAISSR 113


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 261 ACQDGVRQ*TPGFRPGQEYWGVLG 332
           AC   V   T   +    YWG+LG
Sbjct: 321 ACMRSVDAKTISVQQWNSYWGILG 344


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 261 ACQDGVRQ*TPGFRPGQEYWGVLG 332
           AC   V   T   +    YWG+LG
Sbjct: 321 ACMRSVDAKTISVQQWNSYWGILG 344


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 282 VVHRPDTQL 256
           V+HRPDT+L
Sbjct: 146 VIHRPDTKL 154


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -1

Query: 282 VVHRPDTQL 256
           V+HRPDT+L
Sbjct: 146 VIHRPDTKL 154


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 102 ESRGAVYANDKATRNFRIERARMTSLFD 19
           ES  +   NDK   NF ++R R   LF+
Sbjct: 81  ESDNSKEVNDKKEENFIVDRLR-NDLFE 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,967
Number of Sequences: 438
Number of extensions: 2864
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)