Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_B15
(825 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 64 1e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 6e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 61 1e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 60 3e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 3e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 51 1e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 6e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 5e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 42 7e-06
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 6e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.002
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 32 0.006
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 29 0.039
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 28 0.091
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.64
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 1.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 64.1 bits (149), Expect = 1e-12
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Frame = +2
Query: 44 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTPHLRHA---NIRESEST 202
I SA C + D LL+ Y+R P S +VV L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 203 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 376
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 377 VSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
+ G W + + + +P D QTC KFGS ++ ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 63.3 bits (147), Expect = 3e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 61.7 bits (143), Expect = 8e-12
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 9/162 (5%)
Frame = +2
Query: 62 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTPHLR-------HANIRESESTVRILAD 220
C + D LL+ Y++ P + LT ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 221 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 394
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 395 XSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 352
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 353 GDYALRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVI 529
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 60.9 bits (141), Expect = 1e-11
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +2
Query: 179 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 355
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNAD---G 121
Query: 356 DYALRAR----VSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDF 523
+Y +R + + NG W+ + ++ + +P D QTC KFGS N D++
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSL 181
Query: 524 VI 529
+
Sbjct: 182 AL 183
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 60.9 bits (141), Expect = 1e-11
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Frame = +2
Query: 89 MIDSLLATYDRESPPDSKIVVNLTPHLR-------HANIRESESTVRILADLQMNWIDKR 247
+ D LL+ Y+R P LT L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 248 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSXSWIKR 412
L WN E+G L V SE +W PD+VL N A G+Y + +A + G SW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151
Query: 413 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
+ + ++ +P D Q+C KFGS +N ++D
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 59.7 bits (138), Expect = 3e-11
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Frame = +2
Query: 68 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTPHLRHAN-IRESESTVRILADLQMNW 235
N +++S ++D+LL YD PD V + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 236 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSXSWI 406
+D+RL++ G+ + + R+W+PD N + T R+ +G +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 407 KRLDISTPISMQLDNWPNDMQTCTFKFGS 493
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Frame = +2
Query: 89 MIDSLLATYDRESPP--DSKIVVNLTPHLRHANIRESESTVRILAD---LQMNWIDKRLS 253
+ D LL+ Y++ P ++ V+ + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSXSWIKRLDIST 427
W E+G L V S+ +WRPD+VL N A A +A + + G W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 428 PISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
+ ++ +P D QTC KFGS ++ ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 56.8 bits (131), Expect = 2e-10
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 12/175 (6%)
Frame = +2
Query: 32 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTPHLRH---ANIRE 190
++C +A + + D LL+ Y+R P ++ V + L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 191 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 367
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 368 ----RARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
+A + + G W + + ++ +P D QTC KFGS ++ +D
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.4 bits (130), Expect = 3e-10
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Frame = +2
Query: 65 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTPHL--RHANIRESESTVRILADLQMN 232
++ T+L + L YD P S +I N+T L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 233 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSXS 400
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GS S
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 401 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFVID 532
+ + + +WP D C FGS +H+ +E++ +D
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLD 202
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Frame = +2
Query: 89 MIDSLLATYDRESPP--DSKIVVNLTPHLRHANIRESESTVRILAD---LQMNWIDKRLS 253
+ D LL+ Y++ P ++ V+ + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 254 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSXSWIKRLD 418
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 419 ISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
+ S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.4 bits (130), Expect = 3e-10
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 221 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 394
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 395 XSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
++ + + + +P D Q C KFGS ++ ++D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 50.8 bits (116), Expect = 1e-08
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Frame = +2
Query: 62 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTPHLRHANIRESESTVRILADLQ 226
C++ TS S + L YDR+ P+ K ++ ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 227 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSX 397
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 398 SWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNXDEM 517
+ TP+ + D+ WP D+ CT S H +E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +2
Query: 233 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSXSW 403
W D L WNA E+ G V R+WRPD +L N A + VS+ G W
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 404 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMD 520
+ + + ++ +P D Q C K+ S ++ +++
Sbjct: 122 LSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLE 160
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 6e-08
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 8/147 (5%)
Frame = +2
Query: 77 SLSLMIDSLLATYDRESPPD----SKIVVNLTPHLRHAN-IRESESTVRILADLQMNWID 241
++++++++LL Y+ P + VV +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 242 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSXSWIKR 412
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 413 LDISTPISMQLDNWPNDMQTCTFKFGS 493
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 12/158 (7%)
Frame = +2
Query: 89 MIDSLLATYDR------ESPPDSKIVVNLTPHLRH-ANIRESESTVRILADLQMNWIDKR 247
++D++L YD E+ D +V + +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 248 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSXSWIKR 412
L +N G T L + R+W PD+ N + + R+ NGS + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 413 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFV 526
+ ++ M L +P D Q C+ + S D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Frame = +2
Query: 68 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTPH-LRHANIRESESTVRILADLQMNW 235
N ++S ++DS +YD+ P+ + V +T + L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 236 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 388
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 389 GSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
GS + RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 42.3 bits (95), Expect = 5e-06
Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Frame = +2
Query: 89 MIDSLLATYDR------ESPPDSKIVVNLTPHLRH-ANIRESESTVRILADLQMNWIDKR 247
++D++L YD E+ D VV + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 248 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSXSWIKR 412
L +N G T L + R+W PD+ N + + R+ NGS + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 413 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFV 526
+ ++ M L +P D Q C+ + S D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 41.9 bits (94), Expect = 7e-06
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 13/155 (8%)
Frame = +2
Query: 68 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTPH-LRHANIRESESTVRILADLQMNW 235
N ++S ++DS +YD+ P+ + V +T + L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 236 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 388
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 389 GSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 493
GS + RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.5 bits (78), Expect = 6e-04
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +2
Query: 191 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 358
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 359 YALRAR---VSNNGSXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFV 526
++ + ++ + ++ +L + +M+ +++P+D Q C+ S H ++ F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 299 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSXSWIKRLDISTPISMQLDNWPNDMQ 469
+ +WRPD NA + T + + + + ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 470 TCTFKFGSRMHNXDEMDFVID 532
C + S H DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.006
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Frame = +2
Query: 65 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLTPHLRH-ANIRESESTVRILADLQM 229
E+ S ++D+LL + YD+ P + VN++ L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 230 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSXS 400
W D RL + N ++ + + +W PD ++ R+ NG+ +
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 401 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFV 526
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 32.3 bits (70), Expect = 0.006
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Frame = +2
Query: 65 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLTPHLRH-ANIRESESTVRILADLQM 229
E+ S ++D+LL + YD+ P + VN++ L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 230 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSXS 400
W D RL + N ++ + + +W PD ++ R+ NG+ +
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 401 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFV 526
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 32.3 bits (70), Expect = 0.006
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 8/162 (4%)
Frame = +2
Query: 65 ENATSLSLMIDSLLAT--YDRE--SPPDSKIVVNLTPHLRH-ANIRESESTVRILADLQM 229
E+ S ++D+LL + YD+ P + VN++ L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 230 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSXS 400
W D RL + N ++ + + +W PD ++ R+ NG+ +
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 401 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFV 526
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.5 bits (63), Expect = 0.039
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 305 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSXSWIKRLDISTPISMQLDNWPNDMQTC 475
+W P V + N ++A T + + + +G RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 476 TFKFGSRMHNXDEM 517
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 28.3 bits (60), Expect = 0.091
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Frame = +2
Query: 221 LQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNG 391
LQ W D RL + N ++ + + +W PD ++ R+ NG
Sbjct: 164 LQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNG 223
Query: 392 SXSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNXDEMDFV 526
+ +++ R + +L+ +P D C+F S + + +V
Sbjct: 224 TVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.64
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +2
Query: 299 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSXSWIKRLDISTPISMQLDNWPND 463
+ LW+PD LNA + AL + S+ N + + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 464 MQTC 475
+Q C
Sbjct: 127 IQIC 130
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 85 GQ*CCVFAFCRTSYSTSEEKXVTRIIS 5
G+ CC F T Y + K VT+ IS
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCIS 628
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 286 PSAAAPFPCVPTQS 245
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,404
Number of Sequences: 438
Number of extensions: 4559
Number of successful extensions: 83
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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