Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_B08
(801 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 50 2e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 49 4e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 46 4e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 46 4e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 45 7e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 7e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 45 7e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 45 9e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 7e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 7e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 38 8e-05
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 1.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 4.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.8 bits (116), Expect = 1e-08
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 346
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 347 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXF 514
PD+VL N A G+Y +R + + NG V + + ++ + +P D TC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 515 XXGSRMXNSD 544
GS N D
Sbjct: 168 KFGSWTFNGD 177
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.4 bits (115), Expect = 2e-08
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V++NGS + + + + +P D C GS + + D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.4 bits (115), Expect = 2e-08
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V++NGS + + + + +P D C GS + + D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V++NGS + + + + +P D C GS + + D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 49.6 bits (113), Expect = 3e-08
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V+++GS + + M + +P D C GS + + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 49.2 bits (112), Expect = 4e-08
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V+++GS + + M + +P D C GS + + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V+++GS + + + + +P D C GS + + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V+++GS + + + + +P D C GS + + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G Y V+++GS + + + + +P D C GS + + D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.2 bits (107), Expect = 2e-07
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Frame = +2
Query: 173 KIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 343
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 344 RPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXF 514
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 515 XXGSRMXNSDXXDXXID 565
GS + + + + +D
Sbjct: 186 NFGSWVHSGEEVNIFLD 202
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.4 bits (105), Expect = 3e-07
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Frame = +2
Query: 140 QRTIGTPPPYSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 319
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 320 L-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPN 493
L + RLW+PDV++ N+A G Y V NNG+ + + + + +P
Sbjct: 98 LRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPF 157
Query: 494 DMXTCXFXXGS 526
D C GS
Sbjct: 158 DDQRCEMKFGS 168
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 46.0 bits (104), Expect = 4e-07
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 385
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 386 GDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGS 526
R+ +G V RL I M L N+P D C GS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 46.0 bits (104), Expect = 4e-07
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = +2
Query: 176 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 343
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 344 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXX 520
PD+VL N A G + +A + G V + + + +P D TC
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 521 GS 526
GS
Sbjct: 164 GS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 7e-07
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXF 514
PD+VL N A G+Y + +A V +G V + S+ + +P D+ TC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 515 XXGS 526
GS
Sbjct: 170 KLGS 173
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 7e-07
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXG 523
PD+VL NA A +A + + G V + + + +P D TC G
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 524 S 526
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 45.2 bits (102), Expect = 7e-07
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 427
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 428 VSXIKRLDISTPISMXLXNWPNDMXTCXFXXGS 526
V + + + +P D TC GS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 44.8 bits (101), Expect = 9e-07
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 394
+ E + + + +W D RLS+ S + ER+WRPD N +
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 395 ALR---ARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGS 526
+ R+S +G + RL I M L N+P D +C GS
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.0 bits (99), Expect = 2e-06
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 418
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 419 NGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGSRMXNSDXXD 553
G VS + + + +P D +C GS N D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 41.9 bits (94), Expect = 7e-06
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = +2
Query: 182 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 358
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 359 L--LNAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGS 526
+ + + ++ V N+G++ + + WP D+ C S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIAS 179
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 3/120 (2%)
Frame = +2
Query: 176 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 352
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 353 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXXGS 526
+L N A + VS+ G V + + + + +P D C S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.1 bits (92), Expect = 1e-05
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Frame = +2
Query: 143 RTIGTPPPYSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 316
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 317 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMXLXN 484
V SE +W PD+VL N A G+Y + +A + + G V + + +
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 485 WPNDMXTCXFXXGS 526
+P D TC GS
Sbjct: 152 FPFDEQTCFMKFGS 165
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 38.3 bits (85), Expect = 8e-05
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Frame = +2
Query: 179 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRP 349
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 350 DVVLLNAAATTAGDYAL---RARVSNNGSVSXIKRLDISTPISMXLXNWPNDMXTCXFXX 520
D+ N + + R+ NGSV R+ ++ M L +P D C
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 521 GSRMXNSD 544
S +D
Sbjct: 179 ASYGWTTD 186
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.2 bits (50), Expect = 1.4
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Frame = +2
Query: 176 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 337
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 338 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMXLXNWPNDMX 502
LW+PD LNA + AL + S+ N +V R+ M +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 503 TC 508
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.4
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMXLXNWPNDMX 502
+ +WRPD NA + T + + + ++ + +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 503 TCXFXXGSRMXNSD 544
C S +D
Sbjct: 176 ECKLQMESLSHTTD 189
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 319 PSAAAPLPCVPTQS 278
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,789
Number of Sequences: 438
Number of extensions: 3653
Number of successful extensions: 58
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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