Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_A09
(824 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.002
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.12
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.16
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.21
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.37
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.64
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.64
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.64
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.85
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.85
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.85
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.85
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.85
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.85
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 0.85
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.5
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 2.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 2.0
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 6.0
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +1
Query: 97 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 264
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 265 IDKRLSWNAGR 297
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
Score = 26.2 bits (55), Expect = 0.37
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 417 NGSVSXIKRLDISTPISMQLDNWPNEMQTWXFQFG 521
+G V RL I M L+N+P + Q QFG
Sbjct: 115 DGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 91 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 255
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 256 MNWIDKRLSWNA 291
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 302 GCSTWLVSSERLWRPDVVLLNAA 370
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.1 bits (57), Expect = 0.21
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 296 EWGCSTWL-VSSERLWRPDVVLLNAA 370
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.37
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 302 GCSTWLVSSERLWRPDVVLLNAA 370
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.64
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 118 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 282
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 283 WNAGRMG 303
WN G
Sbjct: 118 WNESEYG 124
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.4 bits (53), Expect = 0.64
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 118 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 282
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 283 WNAGRMG 303
WN G
Sbjct: 118 WNESEYG 124
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.64
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
+ RLW+PDV++ N+A
Sbjct: 100 IPPHRLWKPDVLMYNSA 116
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 303
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 303
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 303
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 303
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 303
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.85
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 208 NIRESESTVRILADLQMNWIDKRLSWNAGRMG 303
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.85
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 97 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 264
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 265 IDKRLSWNAGRMGLQHLA 318
D RL++ R G++ L+
Sbjct: 68 TDPRLAFKK-RTGVETLS 84
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 24.2 bits (50), Expect = 1.5
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 329 ERLWRPDVVLLNAA 370
+++W+PD+VL N A
Sbjct: 106 DKVWKPDIVLFNNA 119
Score = 22.2 bits (45), Expect = 6.0
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 169 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGRMG 303
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 320 VSSERLWRPDVVLLNAA 370
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 2.0
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 97 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 264
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 265 IDKRLSWNAGRMGLQHLA 318
D RL++ R G++ L+
Sbjct: 68 TDPRLAFKK-RTGVETLS 84
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 2.0
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -2
Query: 421 PLXDTPGAESVVPGGGCSRV*QYHVRPPQAFRGHQPSAAAPFALRSNSVVC 269
PL ES G S +HV PP GH S+A A +C
Sbjct: 489 PLGSVSSTESTCSGEVASLTEYHHVAPPS---GHHASSAPLLAATLAGGLC 536
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 329 ERLWRPDVVLLN 364
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 667 PPXXFREXPPGXPPXXXXARXP 732
PP + PPG PP ++ P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNP 60
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,779
Number of Sequences: 438
Number of extensions: 4789
Number of successful extensions: 41
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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