Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_A08
(834 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 7e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 8e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 45 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 5e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 9e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 36 3e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 2.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 3.5
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 3.5
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 3.5
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 3.5
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 3.5
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 3.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 3.5
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 3.5
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 6.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.1
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.0 bits (119), Expect = 7e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 249
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 250 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAG-ELXSRAR 423
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G ++A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 424 VSNNGSVSW 450
+ G V W
Sbjct: 127 LHYTGKVLW 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.4 bits (110), Expect = 8e-08
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Frame = +1
Query: 136 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 294
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 295 LSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGELXSRARVSNNGSVSW 450
L WN E+G L V SE +W PD+VL NA L ++A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSW 148
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 109 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 273
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 274 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 375
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.0 bits (109), Expect = 1e-07
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Frame = +1
Query: 109 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 267
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 268 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGELXSRARVSNNGS 441
++ +W D +L W+ E+G L V S+ +WRPD+VL NA L ++A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 442 VSW 450
V W
Sbjct: 137 VEW 139
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 48.0 bits (109), Expect = 1e-07
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Frame = +1
Query: 82 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 240
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 241 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTAGELXS 414
T + ++ W D +L WN ++G T V SE +W PD+VL NA + +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 123
Query: 415 RARVSNNGSVSW 450
+A + + G V W
Sbjct: 124 KAILHHTGKVVW 135
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.6 bits (103), Expect = 6e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGELXSRARVSNNGSVSW 450
W E+G L V S+ +WRPD+VL NA L ++A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GELXSRARVSNNGS 441
G + V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.2 bits (102), Expect = 8e-07
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 400 GELXSRARVSNNGS 441
G + V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GELXSRARVSNNGS 441
G + V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 282
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 283 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGELXSR---ARVSNNGSVSWX 453
+D+RL++ G+ + + R+W+PD N + + S R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 454 XRL 462
RL
Sbjct: 122 SRL 124
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 190 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 366
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 367 VVLLNAA--ATTAGELXSRARVSNNGSVSW 450
+L N A ++ + + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.4 bits (100), Expect = 1e-06
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGELXSRARVSNNGSVSW 450
W E+G L V S+ +WRPD+VL NA L ++A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVW 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 387
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 42.3 bits (95), Expect = 5e-06
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 360
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 361 PDVVLL-NAAATTAGELXSRARVSNNGSVSW 450
PD+VL NA S + NG V W
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLW 141
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.5 bits (93), Expect = 9e-06
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Frame = +1
Query: 88 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 252
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 253 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGELXSRARV 426
L++ W D + WN ++G L + RLW+PDV++ N+A G + V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 427 SNNGS 441
NNG+
Sbjct: 131 KNNGT 135
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 38.7 bits (86), Expect = 7e-05
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Frame = +1
Query: 112 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 279
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 280 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGELXSRARVSNNGSVS 447
W D LSW ++ G + V S+ +W PD+ + N+ T G + V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +1
Query: 124 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 288
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 289 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGELXSRARVSNNGSVSWXXR 459
RLS+ S + ER+WRPD N + T R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 460 L 462
L
Sbjct: 156 L 156
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +1
Query: 136 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 294
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 295 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 381
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.4 bits (48), Expect = 2.6
Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
Frame = +1
Query: 190 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 351
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 352 LWRPDVVLLNAAATTAGEL---XSRARVSNNGSVSWXXRL 462
LW+PD LNA + L S + N +V + R+
Sbjct: 71 LWQPDPYFLNAKVSEIAALNHKFSSVTLYRNKTVKYSARM 110
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 726 AGPPXXXXADRXRXXGVPPXPXGPGLXP 643
AG P + G+PP P PG P
Sbjct: 413 AGAPMPPIPNMSNMSGMPPLPNMPGSMP 440
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 333 PSAAAPLPCVPTQS 292
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQ 225
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLGSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 334 TKCCSPTPLRSNSVVCRSNSFE 269
TK C + SNS+ RS SF+
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQ 225
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 6.1
Identities = 18/63 (28%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 226 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 399
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 400 GEL 408
E+
Sbjct: 103 HEM 105
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 6.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 385 AATTAGELXSRARVSNNGSVS 447
AAT AG L R +N+GS S
Sbjct: 528 AATLAGGLCPHRRRANSGSTS 548
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,520
Number of Sequences: 438
Number of extensions: 4324
Number of successful extensions: 55
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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