Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P22
(778 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 56 7e-09
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 30 0.43
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 29 0.98
SPCC613.03 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.98
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 28 1.3
SPCC1183.03c |||frataxin homolog|Schizosaccharomyces pombe|chr 3... 28 1.3
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 28 1.7
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 27 3.0
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 4.0
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 6.9
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 26 6.9
SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces po... 26 6.9
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 55.6 bits (128), Expect = 7e-09
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Frame = -2
Query: 612 LDLELEIEHWENYEPEGGESHPAPHDAPHCEDPDFNMDADYDPNEARTNLVEEIKRNLGN 433
LD + + E WE+ E + D+ + P+F D D D N E++ ++ N
Sbjct: 428 LDEDFDPEKWESKMSEIFNENYYEEDS--AKKPEFGDDIDIDDIAQVDNGSEDLG-SIEN 484
Query: 432 K------RRDRKKKSKLAELLSGERPTYVPGDLPYAHFMEQYYGMDCEDVIAGDLPTRFK 271
K R++ KKS ++ +R ++E+ YG+ E VI + ++F+
Sbjct: 485 KTVEDTGNREKSKKSLRKDIREKKRKI--------DEYVEEKYGVP-EAVIVKN--SKFR 533
Query: 270 YRQVLPNDFGLSVEEILLADDKELTQWVPLKKIVKYR-PQHVEKGDLNTYAAKAADINLK 94
Y+QV P FGL + +IL A D +L +V LKK+ YR P+ + + D Y K K
Sbjct: 534 YQQVAPETFGLDILDILNASDADLNNYVGLKKMTPYRTPEEIAR-DKKKYGKKKRLREWK 592
Query: 93 KKI 85
K++
Sbjct: 593 KQV 595
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 480 EARTNLVEEIKRNLGNKRRDRKKKSKLAELLSGER 376
E +++E ++R GNK+ +KKK+ AE +S ER
Sbjct: 249 ERDESILEFLQRQSGNKKSYKKKKNNTAEGISPER 283
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 28.7 bits (61), Expect = 0.98
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 336 MEQYYGMDCEDVIAGDLPTRFKYRQVLPNDF 244
+EQ+ G + V+A LP+ ++ +VL NDF
Sbjct: 1580 IEQFDGQKKKCVLASSLPSEERFTEVLTNDF 1610
>SPCC613.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 189
Score = 28.7 bits (61), Expect = 0.98
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = -2
Query: 603 ELEIEHWENYEPEG----GESHPAPHDAPHCEDPDFNMDADYDPNEARTNLVE 457
E E+ H E Y P G E+ P D H + D D P E R + V+
Sbjct: 124 EFEMHHVEKYHPAGLDEPDENWNHPEDIEHFQKHDEIFHGDKKPEERRKHFVK 176
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 28.3 bits (60), Expect = 1.3
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Frame = -2
Query: 603 ELEIEHWENYEPEGGESHPAPHDAPHCE---DPDFNMDADYDPNEARTNLVEEIKRNLGN 433
+L++ +E+YEPE GE H + E D M Y NE + I L +
Sbjct: 37 KLKLLSYEDYEPEVGEGHTKFIEHGEIELKHSDDAVMSLGYFKNELIAGINNTIDGKLID 96
Query: 432 KRRDRKKKSKLAELLSGERPTYVPGDLPY 346
R +K KL E + R T D Y
Sbjct: 97 HLRLYGRKDKLFEEKNALRLTDFDNDEQY 125
>SPCC1183.03c |||frataxin homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 158
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -2
Query: 519 DPDFNMDADYDPNEARTNLVEEIKRNLGNKRRDRKKKSKLAELLSGERPTYVPGDLPYAH 340
D +++ AD D + + E++ +G K D + + + L+ GE+ TYV P AH
Sbjct: 44 DLEYHRVAD-DTLDVLNDTFEDLLEEVGKKDYDIQYANGVITLMLGEKGTYVINKQPPAH 102
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 600 LEIEHWENYEPEGGESHPAPHDAPHCEDPDFNMDADYDPNE 478
+ +EH EN EPE ++ + P + D + D PNE
Sbjct: 242 ITVEHAENAEPETPRNNVSFSRKPSIAEQDSSQDITMPPNE 282
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -1
Query: 187 AAQEDSQVSTSTRGEGRPQYLRSESGRYQLEEENITESLQGFTRGARSNHTRAES 23
AAQ+ S+V + E +P L + + + EEN T +G N+T AES
Sbjct: 398 AAQQTSEVEANNHQE-KPSSLPAVE-QINVNEENNTPETEGLEDEKEENNTAAES 450
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 124 VGIEVSLLHVLRSILDYLLERHPLRELFVVCQKNLL 231
V E+S++ LR LD L R+PL+ + QK L+
Sbjct: 1240 VAAEISVMRSLRDKLDSFLLRYPLKVSTTLKQKLLI 1275
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -2
Query: 294 GDLPTRFKYRQVLPND--FGLSVEEILLADDKELTQWVPLKKI--VKYRP 157
G P + Q LP FGL + + L D E +W P KI KY P
Sbjct: 48 GSDPQSLRGLQKLPRTLYFGLPLPDSELDDTGEAKRWFPRNKIRTAKYTP 97
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -2
Query: 543 PHDAPHCEDPDFNMDADYDPNEARTNLVE--EIKRNLGNKRRDR 418
P + H ED D+N D+D D N E + +++ ++R+ +
Sbjct: 597 PVASAHDEDDDWNSDSDNDENNVEIVTAEAMTLAQDIASRRKSK 640
>SPCC1235.03 |||SMR and CUE domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 399
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -2
Query: 540 HDAPHCEDPDFNMDADYDPNEARTNLVEEIKRNLGNKRRDRKKKSKLA 397
+D D N A + + T I N+G++ R RKKK+K A
Sbjct: 19 NDLVRSSDELLNHRAIQESEQIETAADALITSNIGHRSRQRKKKTKKA 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,212,523
Number of Sequences: 5004
Number of extensions: 37919
Number of successful extensions: 190
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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