Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P22
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0299 - 23930657-23932627 81 1e-15
05_04_0113 + 18085705-18085833,18086442-18086885 33 0.33
03_06_0346 - 33287761-33287895,33288418-33288489,33288577-332886... 31 0.77
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 30 1.8
04_03_0306 + 14136338-14136686,14137408-14137442,14137701-141377... 30 2.4
03_06_0275 + 32806682-32807197,32808118-32808198,32808293-328085... 29 3.1
03_02_0128 - 5781932-5782123,5782296-5782377,5782452-5782779,578... 29 3.1
01_01_0887 + 6978869-6979053,6979183-6979558,6979651-6979734,697... 29 3.1
05_01_0576 - 5130589-5131995 29 5.4
11_04_0177 - 14547782-14548142,14549740-14549837,14550020-14550106 28 7.2
04_01_0089 + 958853-959374 28 7.2
07_03_1363 - 26022333-26023225,26023319-26023451 28 9.5
07_03_1228 - 25009736-25010965 28 9.5
06_03_0391 - 20287755-20288084,20288174-20288414,20288519-202888... 28 9.5
05_03_0607 - 16149180-16149617,16149795-16150100 28 9.5
03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399 28 9.5
01_01_0016 - 88825-90411 28 9.5
>05_05_0299 - 23930657-23932627
Length = 656
Score = 80.6 bits (190), Expect = 1e-15
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = -2
Query: 336 MEQYYGMDCEDVIAGDLPTRFKYRQVLPNDFGLSVEEILLADDKELTQWVPLKKIVKYR 160
ME+YY +D ED I GDL TRFKY+QV PN FGLS EIL +DDK+L Q+V +KKI YR
Sbjct: 504 MEEYYKLDYEDTI-GDLKTRFKYKQVKPNSFGLSTYEILASDDKDLNQYVSMKKIAPYR 561
>05_04_0113 + 18085705-18085833,18086442-18086885
Length = 190
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1
Query: 241 AVGGGDSSGRRQRAHAVGAAQEDSQVSTSTR 149
A+GGG G R + AA+EDS +TSTR
Sbjct: 9 ALGGGGGGGERLPVPPMAAAEEDSPAATSTR 39
>03_06_0346 -
33287761-33287895,33288418-33288489,33288577-33288645,
33288782-33288847,33289025-33289228,33291194-33291445
Length = 265
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -1
Query: 265 TSAAQRLRAVGGGDSSGRRQRAHAVGAAQEDSQ-VSTSTRGEGRPQYLRSESGRYQLEEE 89
T + R GGG +GRR++ A + S+ VSTS G G SE+ R++ +
Sbjct: 38 TEQSNGSRGGGGGGGAGRRRQREAPALEDDSSRIVSTSGGGGGGQDLTDSEAKRFKASKS 97
Query: 88 N 86
+
Sbjct: 98 S 98
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = -1
Query: 241 AVGGGDSSGRRQRAHAVGAAQEDSQVSTSTRGEGRPQYLRSESGRY 104
A GGGD R A AA ++ + RGEGR Y R RY
Sbjct: 417 AAGGGDKL-RAGACLAAAAAASNATARDACRGEGREWYTRGCPSRY 461
>04_03_0306 +
14136338-14136686,14137408-14137442,14137701-14137778,
14138046-14138124,14138731-14138823,14139472-14139556,
14140270-14140345,14140669-14140794,14141039-14141137,
14141238-14141339,14141561-14141671,14141809-14141904,
14142488-14142539,14142624-14142735,14142879-14142943,
14144124-14144521,14145236-14145330,14145989-14146015,
14146081-14146156,14146368-14146421,14146741-14146863,
14146955-14147023
Length = 799
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 259 AAQRLRAVGGGDSSGRRQRAHAVGAA 182
+A+R R VG G S+G+R R A G A
Sbjct: 37 SAKRSRGVGAGGSAGKRARVSAAGVA 62
>03_06_0275 +
32806682-32807197,32808118-32808198,32808293-32808568,
32808670-32809182
Length = 461
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 238 VGGGDSSGRRQRAHAVGAAQEDSQVSTSTRGEGRPQYLRSESGRYQLEEENI 83
V GG SS RR+R G +E+ Q GE + R R Q+ EE++
Sbjct: 323 VSGGGSSERREREREHGRRREEEQ-GEEEHGERGEKARRYHKVRAQVREESV 373
>03_02_0128 -
5781932-5782123,5782296-5782377,5782452-5782779,
5782870-5783124,5783495-5783583,5783967-5783992
Length = 323
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 175 DSQVSTSTRGEGRPQYLRSESGRYQLEEENITESLQGFTRGARSNHTR 32
DS +S +G G L+ + G + E+E + + TR A S H+R
Sbjct: 154 DSSLSAK-KGSGSSSKLQDKKGSKKFEQEQVIQKTPSTTRPATSYHSR 200
>01_01_0887 +
6978869-6979053,6979183-6979558,6979651-6979734,
6979838-6979903,6980938-6981007,6981333-6981718,
6982114-6982154,6982661-6982757
Length = 434
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -2
Query: 516 PDFNMDADYDPNEARTNLVEEIKRNLGNKRRDRKKKSKLAELLSGERPTY 367
P N ++ A L ++++++ NKR ++K+ +AEL E Y
Sbjct: 143 PAVNQGGPWEERYAMIRLAQKLQKSKRNKRWRKRKRKHVAELFQKEHADY 192
>05_01_0576 - 5130589-5131995
Length = 468
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -1
Query: 268 PTSAAQRLRAVGGGDSSGRRQ-RAHAVGAAQEDSQVSTSTR 149
P S A+ + AVGGGD+SG+R +A A S++S TR
Sbjct: 32 PPSPAEVVVAVGGGDASGKRSFQADDDDAMGVVSRLSKRTR 72
>11_04_0177 - 14547782-14548142,14549740-14549837,14550020-14550106
Length = 181
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 232 GGDSSGRRQRAHAVGAAQEDSQVSTSTRGEGRPQYLRSESGR 107
GG GRR AV A +E + + + GE + R SGR
Sbjct: 128 GGGGGGRRVEEVAVDAGEEAEERTKAGEGEEAESWRRDGSGR 169
>04_01_0089 + 958853-959374
Length = 173
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 235 GGGDSSGRRQRAHAVGAAQEDSQVSTSTRGEGRPQYL 125
GGG+ GRR+R V A++ + R P YL
Sbjct: 133 GGGEGEGRRRRGEGVAASRGGGEDREDQRRRRPPVYL 169
>07_03_1363 - 26022333-26023225,26023319-26023451
Length = 341
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/67 (35%), Positives = 32/67 (47%)
Frame = -1
Query: 256 AQRLRAVGGGDSSGRRQRAHAVGAAQEDSQVSTSTRGEGRPQYLRSESGRYQLEEENITE 77
A A GGG ++G A +A DS ++ST G Q S +G Y L ENI+
Sbjct: 184 AANAAAGGGGATTG------AAASAGADSPAASSTSGAS--QCSPSSAG-YVLTTENISR 234
Query: 76 SLQGFTR 56
L G+ R
Sbjct: 235 MLDGWAR 241
>07_03_1228 - 25009736-25010965
Length = 409
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = -2
Query: 603 ELEIEHWENYEPE-GGESHPAPHDAPHCEDPDFNMDADYDPNEARTNLVEEIKRNLGNKR 427
E E E E EPE GGE P + E+ + + + +P E EE + +
Sbjct: 308 EEEEEEEEEEEPEEGGEEEEEPEEGGEEEEEEEEEEEEEEPEEG----AEEEEDDEEEDE 363
Query: 426 RDRKKKSKLAELLSGERPTYVPGDLPYAHFMEQYYGMDCEDVIAGD 289
+ +++ + E + E V +P F + G+ V+ D
Sbjct: 364 EEEEEEEDIEEDENEEEEEEVEDTMPVVSFFAKMSGIMMNVVVRED 409
>06_03_0391 -
20287755-20288084,20288174-20288414,20288519-20288844,
20288954-20289097,20289260-20289380,20289645-20289733,
20289821-20289891,20290165-20290309,20290390-20290479,
20290991-20291239
Length = 601
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 174 IVKYRPQHVEKGDLNTYAAKAADINLKKKILPSLF 70
IVK P H++ DL ++ D+++ K+ PS F
Sbjct: 236 IVKDLPPHLQSLDLEAIGSQITDMDISKEAAPSEF 270
>05_03_0607 - 16149180-16149617,16149795-16150100
Length = 247
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 561 GESHPAPHDAPHCEDPDFNMDADYDPNEARTNLVEEIKRNLGNKRRDRKKKSK 403
GE + +P D DP + D+DY P E KR G+K D+ K+ K
Sbjct: 122 GEKNGSPSDV----DPSLHYDSDYLPEENNNRSSSSSKRPKGSK-IDKGKRVK 169
>03_05_1067 - 30105850-30106034,30106036-30106192,30106301-30106399
Length = 146
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 250 RLRAVGGGDSSGRRQRAHAVGAAQEDSQVSTSTRGE 143
R R V S GRR R A G +E+ +V S RG+
Sbjct: 44 RRRPVAVSYSHGRRLRCIAEGRREEEEEVGRSRRGK 79
>01_01_0016 - 88825-90411
Length = 528
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = -2
Query: 564 GGESHPAPHDAP-----HCEDPDFNMDADYDPNEARTNLVEEI 451
G E +PAP P HC PD ++ DP A +++E++
Sbjct: 57 GAECNPAPGPGPADSLLHCVSPDADLVVPDDPAHAFEDVLEQL 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,612,760
Number of Sequences: 37544
Number of extensions: 278846
Number of successful extensions: 1483
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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