Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P19
(785 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 31 0.79
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 31 1.4
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 30 2.4
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 29 3.2
12_01_0302 - 2286171-2286341,2286747-2286968 29 4.2
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.5
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 29 5.5
02_05_0693 - 30977323-30977421,30977783-30977843,30978874-309789... 28 7.3
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 9.7
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 31.5 bits (68), Expect = 0.79
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = -2
Query: 718 PXASNHPPXRXGYINPIINPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSA 539
P + PP R I P P TP P SIS P P AP P + + PS+
Sbjct: 75 PPPAPRPPRRHHRIPPPPPPLLPTPPPPP-ASISPTPAPPLPPPPAPAPPPTPTPKFPSS 133
Query: 538 YLTPSSLGMXKGVSPPYF 485
PS + P+F
Sbjct: 134 SANPSPPDAYPFTNYPFF 151
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -1
Query: 701 PSPAXXVHQPDHQSPIPYTNHPRLNIHFHQSPDAVXEGVRAGV 573
P P H P H P P+ HP + H H PD E ++A V
Sbjct: 54 PHPPHHPHPPHHPHP-PHHPHPP-HHHPHPHPDPAAEAIQANV 94
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Frame = -2
Query: 724 FXPXASNHPPXRXGY--INPIINPRF--HTPTTPDL--TSISINPLTPX*KEFAPGLKPP 563
+ P + ++ P Y +P +P ++PT+P TS +P +P +P P
Sbjct: 1752 YSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPS 1811
Query: 562 LSSEAPSAYLTPSSLGMXKGVSPPY 488
PS +PSS SP Y
Sbjct: 1812 SVKYTPSHAYSPSSPNYYSSTSPTY 1836
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Frame = -2
Query: 724 FXPXASNHPPXRXGY--INPIINPRF--HTPTTPDL--TSISINPLTPX*KEFAPGLKPP 563
+ P + ++ P Y +P +P ++PT+P TS S +P +P +P P
Sbjct: 1690 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPS 1749
Query: 562 LSSEAPSAYLTPSS--LGMXKGVSPPY 488
+ +PS +PSS L SP Y
Sbjct: 1750 SAKYSPSHAYSPSSPRLSPYSQTSPNY 1776
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 81 RLQRSRKKHGEDLPTGGRSRRKGEKLE*MQREEQ 182
RL+R RK + D+ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 73 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 219
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 240 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDPRHVSSDSFGVYVKS*SL 61
P F T+LY ++KD S+ L S+ Y L+DP S D+ + +
Sbjct: 1349 PEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVGYA-LLDPTWASQDNTSTAIGNIVA 1407
Query: 60 ILHSF 46
+LHSF
Sbjct: 1408 LLHSF 1412
>02_05_0693 -
30977323-30977421,30977783-30977843,30978874-30978996,
30979258-30979340,30979847-30979924,30980375-30980506,
30980685-30980728,30980966-30981090,30981468-30981769,
30981877-30981994,30982444-30982574,30983082-30983276,
30983362-30983646
Length = 591
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -3
Query: 288 IGTRVYVFDPSCYFPTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQL 121
+G RVY FD + P TV+++NI + + +I +L S E+Y ++
Sbjct: 310 MGVRVYGFDETSSIPMDGSGTVMWENIAGYEPQKRE--IEDTILLALQSPEVYDEI 363
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 441 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 352
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,418,335
Number of Sequences: 37544
Number of extensions: 439965
Number of successful extensions: 1376
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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