Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_P11
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    55   5e-08
Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocar...    31   1.2  
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    29   2.8  
U28740-6|AAA68322.4|  317|Caenorhabditis elegans Tetraspanin fam...    28   6.5  
U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine recept...    28   8.6  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    28   8.6  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -3

Query: 522 EAVFSELQRQFECCGNTGAINYGQFT-LPESCCVKKSILSTFAGNNCTVDAANPGCGPKI 346
           E+ + +  + FECCG T + ++  FT +P+SCC+++  +   A  N  +    PGC   +
Sbjct: 132 ESAWDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAPL--FEPGCIHSV 187

Query: 345 GELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 238
            +   K    + G+   +A +++VG  FA CL+ SI
Sbjct: 188 EQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 12/22 (54%), Positives = 19/22 (86%)
 Frame = -2

Query: 733 VIAFXGCCGAIRESHCMVVTYA 668
           ++ F GCCGAIRE++C+ V++A
Sbjct: 65  LLGFLGCCGAIRENYCLTVSFA 86


>Z81038-7|CAB02764.1|  453|Caenorhabditis elegans Hypothetical
           protein C25A1.11 protein.
          Length = 453

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 221 GTPKMKTSRDEHSNKKKKKNDHFTHFTNLLAAQVP 117
           G  K + +R+ HS  ++++ +  TH+ N LA  VP
Sbjct: 38  GENKERFARENHSEIERRRRNKMTHYINELAEMVP 72


>AF039569-1|AAB99999.1|  451|Caenorhabditis elegans aryl hydrocarbon
           receptor nucleartranslocator ortholog AHA-1 protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -1

Query: 221 GTPKMKTSRDEHSNKKKKKNDHFTHFTNLLAAQVP 117
           G  K + +R+ HS  ++++ +  TH+ N LA  VP
Sbjct: 38  GENKERFARENHSEIERRRRNKMTHYINELAEMVP 72


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 516 VFSELQRQFECCGNTGAINYGQF 448
           +   +QR++ CCG  GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298


>Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical
           protein T28F3.3 protein.
          Length = 393

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 617 EEDADHHLHNDDHQQEXCVRDDH 685
           EE  DHH H+ DH  E  +R +H
Sbjct: 45  EELHDHHEHDHDHHDEQLIRKNH 67


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -3

Query: 504 LQRQFECCGNTGAINYGQF--TLPESCCVK 421
           LQ  F CCGN G  ++  F   +P SC ++
Sbjct: 200 LQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229


>U28740-6|AAA68322.4|  317|Caenorhabditis elegans Tetraspanin family
           protein 11 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 739 MFVIAFXGCCGAIRESHCMVVTYA 668
           + V+AF GCCGA +E   ++  Y+
Sbjct: 93  VIVVAFLGCCGAAKEWRPLLCCYS 116


>U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformd protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 239 MELARHSANRAPTTSTQATPR 301
           M ++RH + R+ TT+T ATPR
Sbjct: 1   MTVSRHYSRRSTTTTTTATPR 21


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 239 MELARHSANRAPTTSTQATPR 301
           M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,349,465
Number of Sequences: 27780
Number of extensions: 298063
Number of successful extensions: 943
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)