Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P05
(777 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 172 3e-43
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 172 3e-43
07_01_0761 + 5849466-5850677 31 1.0
04_04_1321 + 32634471-32634566,32635102-32635193,32635290-326355... 30 1.8
08_02_0918 - 22617388-22617693,22617799-22617848,22618538-226188... 28 7.2
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 7.2
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 172 bits (418), Expect = 3e-43
Identities = 88/152 (57%), Positives = 106/152 (69%)
Frame = -3
Query: 733 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKG 554
TI DKV + + EK IPVD+VF +DEMID IGVT+G V G R P + +G
Sbjct: 190 TIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR-LPRKTHRG 248
Query: 553 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 374
LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+ + A TE+
Sbjct: 249 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-SHAACTEF 302
Query: 373 DLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 303 DRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 86.2 bits (204), Expect = 3e-17
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 139
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 172 bits (418), Expect = 3e-43
Identities = 88/152 (57%), Positives = 106/152 (69%)
Frame = -3
Query: 733 TIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQGAKDTKVSLLVGTQRSYPVRHTKG 554
TI DKV + + EK IPVD+VF +DEMID IGVT+G V G R P + +G
Sbjct: 190 TIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR-LPRKTHRG 248
Query: 553 LRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEY 374
LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG K G+ + A TE+
Sbjct: 249 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE-SHAACTEF 302
Query: 373 DLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 278
D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 303 DRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -1
Query: 294 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 115
KGCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
>07_01_0761 + 5849466-5850677
Length = 403
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = -3
Query: 607 VSLLVGTQRSYPVRHTKGLRKVACI--GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 434
V+LLVG R V V+ + G HP SFT+ RA H K+ RI
Sbjct: 129 VALLVGNDRRLRVLDAAASAAVSLVPDGEHHPINCSFTLGRAASSSGEH------KVLRI 182
Query: 433 GQGIH 419
G +H
Sbjct: 183 GTVVH 187
>04_04_1321 +
32634471-32634566,32635102-32635193,32635290-32635585,
32635665-32635863,32636019-32636223,32637001-32637093
Length = 326
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = -1
Query: 771 KRGSHYXIQLNGVPSRTK*NGPENIWRNLSLSILCLPKMK*LTALVSPKGQRIQRCHFSL 592
++ HY ++ GVP NI N ++ +L PK K T S K R+Q+CH S
Sbjct: 19 EKADHYTTKIGGVPVHAP-VAKFNI-ENRTIYVLVCPKPKCGTNPQSWKVLRVQKCHTS- 75
Query: 591 AHKEATP*DTPRVLGKLPALE 529
A + +T ++ G + + E
Sbjct: 76 AQTDGKVDETDQINGNVCSSE 96
>08_02_0918 -
22617388-22617693,22617799-22617848,22618538-22618817,
22619654-22620340,22622870-22622944,22623150-22623285,
22624801-22625093,22625776-22626597
Length = 882
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = -3
Query: 517 SRVSFTVARAGQKGYHHRTEMNKKIYRIGQG----------IHKKDGKVIKNNASTEYDL 368
++V F + GY H + +N ++ I G IH+ D + E L
Sbjct: 360 AQVIFMNRESANNGYMHTSSVNYELETIRSGTWLDVEHPRKIHRLDLDAVDQQKQLEKYL 419
Query: 367 SEKSITPMGGFPHYGEVNN 311
SEKS P+ FP V++
Sbjct: 420 SEKSNIPIPPFPDSSSVSS 438
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 1 FFFFFFALSNVYFHGLHLRL 60
FFFFFF +N+ FH L+ L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,460,096
Number of Sequences: 37544
Number of extensions: 499787
Number of successful extensions: 1244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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