Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P04
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 132 4e-31
Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical ... 29 2.9
L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid desa... 29 5.0
AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical ... 29 5.0
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 6.6
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 28 8.8
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 8.8
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 28 8.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 132 bits (318), Expect = 4e-31
Identities = 67/146 (45%), Positives = 88/146 (60%), Gaps = 5/146 (3%)
Frame = -3
Query: 786 ENPADVXVXSSRPFGXACCXEVXRAHPVXRXLRDVSXPGAFTXPDPKLHSXEXRLLIVLD 607
ENPADV V S+RP+ + AH + PG T K E RLL++ D
Sbjct: 69 ENPADVVVVSARPYAQRALLKFA-AHTGATAIFGRFSPGCLTNQIQKTFK-EPRLLVISD 126
Query: 606 PAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLR 427
P DHQ +TEASYV +PVI+ NT+SPL+ +DI +PCN K SIGLMWW+LARE+L LR
Sbjct: 127 PRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILR 186
Query: 426 GVLPRDQRW-----DVVVDLFFYRXP 364
G + R + +++ DL+FYR P
Sbjct: 187 GKISRQTGFVLEGKEIMPDLYFYRDP 212
>Z78067-1|CAB01533.1| 1170|Caenorhabditis elegans Hypothetical
protein ZC412.2 protein.
Length = 1170
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 282 MDRSNYFWFSWYHSLFPGLLFILFTFFRXHGRRTNQ 389
M ++F FS + GLLFI +F + HG T++
Sbjct: 690 MQMDSFFMFSLIRDISNGLLFIHNSFLKCHGHLTSR 725
>AF039043-7|AAY86190.1| 103|Caenorhabditis elegans Hypothetical
protein F39C12.4 protein.
Length = 103
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 222 CCTRCSSCFWSTPCSRRMVCP 160
CCT CF ST CS VCP
Sbjct: 53 CCTN-EECFMSTECSYSAVCP 72
>L41807-1|AAA67369.1| 402|Caenorhabditis elegans fatty acid
desaturase protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 291 SNYFWFSWYHSLFPGLLFILFTFFR 365
SN+FW+ W F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281
>AL132951-8|CAC44309.1| 402|Caenorhabditis elegans Hypothetical
protein Y67H2A.8 protein.
Length = 402
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 291 SNYFWFSWYHSLFPGLLFILFTFFR 365
SN+FW+ W F GL+ ++ T+ +
Sbjct: 257 SNWFWYYWVPLSFFGLMLVIVTYLQ 281
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 543 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 436
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 571 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 464
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 173 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 268
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 492 TKSSHSIGLMWWLLA 448
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 173 LLEQGVLQKQELQRVQQAGRYLQP--MKPLAPVF 268
L+EQ ++ +++L+R A R+LQP + PLA F
Sbjct: 1591 LIEQSLVIEEQLRRAAHANRHLQPDNVGPLAQRF 1624
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,616,588
Number of Sequences: 27780
Number of extensions: 302287
Number of successful extensions: 802
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -