Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P03
(796 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 65 1e-10
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 57 2e-08
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 57 2e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 48 1e-05
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 48 1e-05
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 48 1e-05
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 47 3e-05
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 38 0.016
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 38 0.016
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 38 0.016
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 38 0.021
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 36 0.084
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 36 0.084
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 64.9 bits (151), Expect = 1e-10
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = -2
Query: 642 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKA 463
++ A +HI +Q++Q++ RL G WFVRN LH DL L ++ + S RY D+
Sbjct: 809 IWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRL 868
Query: 462 MRHDNRLIVAAADYSPNPDHAGASHRRRPRHVLT 361
RH NRL +A + S P +RR+PR ++T
Sbjct: 869 ERHRNRL-ASALNRSRPPRRL---NRRQPRDLIT 898
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 57.2 bits (132), Expect = 2e-08
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = -2
Query: 648 SVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFD 469
S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + + +Y +
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNE 857
Query: 468 KAMRHDNRL 442
K H N L
Sbjct: 858 KLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 57.2 bits (132), Expect = 2e-08
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = -2
Query: 648 SVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFD 469
S ++ +A+R++ID +Q QSR R+ GAPW++RN ++H DL ++ + + + +Y +
Sbjct: 798 SELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNE 857
Query: 468 KAMRHDNRL 442
K H N L
Sbjct: 858 KLTTHTNPL 866
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = -2
Query: 642 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKA 463
V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + + +++ +++Y ++
Sbjct: 814 VYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERL 873
Query: 462 MRHDNRLIVAAADYS-PNPDHAGASHRRRPRH 370
H N L + N D RR RH
Sbjct: 874 NVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 905
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 48.4 bits (110), Expect = 1e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = -2
Query: 642 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKA 463
V+ AA++H++ ++ LQ++ R GAPW++R D+ DL + + +++ +++Y ++
Sbjct: 616 VYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERL 675
Query: 462 MRHDNRLIVAAADYS-PNPDHAGASHRRRPRH 370
H N L + N D RR RH
Sbjct: 676 NVHPNSLARKLGTAAVVNADPRTRVKRRLKRH 707
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 48.4 bits (110), Expect = 1e-05
Identities = 21/67 (31%), Positives = 39/67 (58%)
Frame = -2
Query: 642 VFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKA 463
++ AA+++ + +Q LQ+R R P++VR LH DL L ++++ + + RY D+
Sbjct: 815 IWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRL 874
Query: 462 MRHDNRL 442
RH + L
Sbjct: 875 RRHHSIL 881
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 47.2 bits (107), Expect = 3e-05
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = -2
Query: 648 SVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERY 475
S ++ +A+ ++ID +Q QS+ R GAPW+VR+ ++ DL + S+ + E+Y
Sbjct: 800 SQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVTNAITELKEKY 857
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.9 bits (84), Expect = 0.016
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 621 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRHDNRL 442
T +Q++++++ R + A + R D+ ++S + AS+RY + H+N L
Sbjct: 880 TQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPL 939
Query: 441 I--VAAADYSPN 412
I + Y PN
Sbjct: 940 IYDLLINAYKPN 951
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.9 bits (84), Expect = 0.016
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 621 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRHDNRL 442
T +Q++++++ R + A + R D+ ++S + AS+RY + H+N L
Sbjct: 880 TQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPL 939
Query: 441 I--VAAADYSPN 412
I + Y PN
Sbjct: 940 IYDLLINAYKPN 951
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.9 bits (84), Expect = 0.016
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 621 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRHDNRL 442
T +Q++++++ R + A + R D+ ++S + AS+RY + H+N L
Sbjct: 880 TQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPL 939
Query: 441 I--VAAADYSPN 412
I + Y PN
Sbjct: 940 IYDLLINAYKPN 951
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 37.5 bits (83), Expect = 0.021
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 621 THIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQKYMKSASERYFDKAMRHDNRL 442
T +Q++++++ R + A + R D+ ++S + AS+RY + H+N L
Sbjct: 433 TQAKKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPL 492
Query: 441 I--VAAADYSPN 412
I + Y PN
Sbjct: 493 IYDLLINAYKPN 504
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 35.5 bits (78), Expect = 0.084
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 666 PS*LNASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 502
P + S V+ A+THI LQ Q++ +L + P++ LH G++ +Q+
Sbjct: 826 PILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 880
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 35.5 bits (78), Expect = 0.084
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 666 PS*LNASVVFAHAARTHIDTLQSLQSRFCRLAVGAPWFVRNVDLHDDLGLESIQK 502
P + S V+ A+THI LQ Q++ +L + P++ LH G++ +Q+
Sbjct: 774 PILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQ 828
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,842,057
Number of Sequences: 53049
Number of extensions: 588454
Number of successful extensions: 1520
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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