Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P01
(779 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0094 + 14378953-14380728 178 5e-45
07_03_1408 - 26353389-26355191 176 2e-44
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 31 1.0
12_01_0400 + 3169597-3170504,3170510-3171269 29 3.1
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 3.1
02_05_0891 - 32554355-32555305 29 5.5
01_03_0032 - 11795368-11795385,11795607-11795670,11795979-117960... 29 5.5
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 7.2
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 28 9.6
>03_03_0094 + 14378953-14380728
Length = 591
Score = 178 bits (433), Expect = 5e-45
Identities = 83/160 (51%), Positives = 115/160 (71%), Gaps = 2/160 (1%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK+++PG+LR+E+ IEV +E+V++TTKGEA+A+ A MTT+ MA+CD
Sbjct: 318 VVKDSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCD 377
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG AK+KRV+M+RDTYPRKWGLGP A +KK ++ +G LDK+GKPNE TP EWL + V
Sbjct: 378 HGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHGKPNEKTPSEWLRNAV-- 435
Query: 254 NVKKEPENGDGVEEG--SRKRTASTANAEDPDVSIEVKQE 141
P GD + G + E+ DV+ E K++
Sbjct: 436 ----LPAGGDAMIAGIAAAPEPEKPKVKEEADVAEETKEK 471
Score = 31.9 bits (69), Expect = 0.59
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D++DA+W + DE+Y RR++ L+
Sbjct: 283 DVMDARWAMDNFNDESYLRRIVMPLE 308
>07_03_1408 - 26353389-26355191
Length = 600
Score = 176 bits (428), Expect = 2e-44
Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK+++PG+LR+E+ I+V +E+V++TTKGEA+A+ A MTT+ MA+CD
Sbjct: 314 VVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMTTAVMATCD 373
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG AK+KRV+M+RDTYPRKWGLGP A +KK ++ +G LDK+GKPNE TP EW+
Sbjct: 374 HGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHGKPNEKTPAEWIR----- 428
Query: 254 NVKKEPENGDG-VEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMD 78
NV P GD + + + AE V+ E +E +D E A+
Sbjct: 429 NVAL-PTGGDAMIASIAAAPEEAKVKAEQDVVATEEVKEKKKKKKHKDEEDAADEGRKRK 487
Query: 77 TSESPETAEQP 45
+ +A P
Sbjct: 488 IEDDDASASVP 498
Score = 34.7 bits (76), Expect = 0.083
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D++DA+W + + DETY RR++ L+
Sbjct: 279 DVMDARWAMDNYNDETYLRRIVMPLE 304
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -1
Query: 245 KEPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTS-E 69
K PE+ E+ S K A T EDP V++E + E + S P + +A ++ E
Sbjct: 1164 KLPEDSTTFEKPSEKDDAGTKQTEDP-VTLEKEPE-----EDKGSVEPTQDNAGLEKPLE 1217
Query: 68 SPETAEQPADDSV 30
E + +P++DSV
Sbjct: 1218 EDEASAKPSEDSV 1230
>12_01_0400 + 3169597-3170504,3170510-3171269
Length = 555
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 349 CEAFGPRPHFLGYVSRSIMTRLSFAATP 432
CEA P H Y +R + R+S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -1
Query: 200 RTASTANAEDPDVSIEVKQEXXXXXXKRDSEA-PAEADATMD--TSESPETAEQPADDSV 30
RTASTA A P + IE +Q KR EA P E D ++ +S + + +SV
Sbjct: 112 RTASTATAGQPKLDIEDEQSEDQKQNKRKKEASPEECDQAVEGLSSAKAKAKAKQVQESV 171
Query: 29 R 27
+
Sbjct: 172 K 172
>02_05_0891 - 32554355-32555305
Length = 316
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -3
Query: 465 DDHVYDGLMRSWGSRETQACHNGTRHVPQKMGSRTESLTEKNPHTTRE 322
D +YD WGS A NGT P++ G + E PH E
Sbjct: 212 DRRLYDLSKSVWGSEAAAAAVNGTTTAPREFG----EMCELYPHLAEE 255
>01_03_0032 -
11795368-11795385,11795607-11795670,11795979-11796046,
11796319-11796455,11796722-11796783,11796889-11796956,
11797045-11797126,11798160-11798269
Length = 202
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = -1
Query: 635 PDCSQKDIIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQE-----IVIVTTKGEAVALAF 471
PD +K + A+ V GA ++ PG+ ++V+ E ++ K A+A+ +
Sbjct: 109 PDIMKKFQVDRGAIKFVLSGANIMCPGLTSPGGSLDVEVEEETPVAIMAEGKQHALAIGY 168
Query: 470 ALMTTSTMASCDHGV 426
M+ + + + G+
Sbjct: 169 TKMSAKDIKTINKGI 183
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.3 bits (60), Expect = 7.2
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = -1
Query: 341 ILIQQGKLDKYGKPN-----ENTPKEWLNSYVNYNVKKEPENGDGVE-EGSRKRTASTAN 180
+ + +GK K GK N E V V E V+ + K+ S+++
Sbjct: 17 VSVSEGKSGKKGKRNAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSS 76
Query: 179 AEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQPADDSV 30
ED S E VK + + + PA+ +++ D+S+ + ++PA V
Sbjct: 77 EEDSSESEEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPV 127
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 338 LIQQGKLDKYGK-PNENTPKEWLNSY--VNYNVKKEPENGDGVEEGSRKRTASTANAEDP 168
L++ D G+ P + +E L Y V++ +EP+N D VEEG+ + +E+P
Sbjct: 4 LVENFDADDLGEMPQNHYNEEQLIPYSDVSHPYNEEPDNMDNVEEGNPYIQQVSLYSEEP 63
Query: 167 D 165
+
Sbjct: 64 E 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,263,245
Number of Sequences: 37544
Number of extensions: 321838
Number of successful extensions: 923
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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