Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_P01
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein. 206 7e-53
BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita ... 206 7e-53
BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita ... 206 7e-53
AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein. 206 7e-53
AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein. 206 7e-53
AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein. 206 7e-53
AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein. 202 1e-51
>U59151-1|AAB94299.1| 514|Homo sapiens Cbf5p homolog protein.
Length = 514
Score = 206 bits (503), Expect = 7e-53
Identities = 99/201 (49%), Positives = 141/201 (70%), Gaps = 12/201 (5%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +A ALMTT+ +++CD
Sbjct: 300 VMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCD 359
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP ++TP W YV+Y
Sbjct: 360 HGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDY 419
Query: 254 N----------VKKEPE-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDS 111
+ V K P+ + + RKR + + + E P + + +K+E + +
Sbjct: 420 SESAKKEVVAEVVKAPQVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKKSKKDKKA 479
Query: 110 EAPAEADATMDTSESPETAEQ 48
+A E+ A +S T ++
Sbjct: 480 KAGLESGAEPGDGDSDTTKKK 500
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D+LDAQW Y+ HKDE+Y RRV+ L+
Sbjct: 265 DVLDAQWLYDNHKDESYLRRVVYPLE 290
>BC010015-1|AAH10015.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 206 bits (503), Expect = 7e-53
Identities = 99/201 (49%), Positives = 141/201 (70%), Gaps = 12/201 (5%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +A ALMTT+ +++CD
Sbjct: 300 VMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCD 359
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP ++TP W YV+Y
Sbjct: 360 HGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDY 419
Query: 254 N----------VKKEPE-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDS 111
+ V K P+ + + RKR + + + E P + + +K+E + +
Sbjct: 420 SESAKKEVVAEVVKAPQVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKKSKKDKKA 479
Query: 110 EAPAEADATMDTSESPETAEQ 48
+A E+ A +S T ++
Sbjct: 480 KAGLESGAEPGDGDSDTTKKK 500
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D+LDAQW Y+ HKDE+Y RRV+ L+
Sbjct: 265 DVLDAQWLYDNHKDESYLRRVVYPLE 290
>BC009928-1|AAH09928.1| 514|Homo sapiens dyskeratosis congenita 1,
dyskerin protein.
Length = 514
Score = 206 bits (503), Expect = 7e-53
Identities = 99/201 (49%), Positives = 141/201 (70%), Gaps = 12/201 (5%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +A ALMTT+ +++CD
Sbjct: 300 VMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCD 359
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP ++TP W YV+Y
Sbjct: 360 HGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDY 419
Query: 254 N----------VKKEPE-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDS 111
+ V K P+ + + RKR + + + E P + + +K+E + +
Sbjct: 420 SESAKKEVVAEVVKAPQVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKKSKKDKKA 479
Query: 110 EAPAEADATMDTSESPETAEQ 48
+A E+ A +S T ++
Sbjct: 480 KAGLESGAEPGDGDSDTTKKK 500
Score = 41.5 bits (93), Expect = 0.003
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D+LDAQW Y+ HKDE+Y RR + L+
Sbjct: 265 DVLDAQWLYDNHKDESYLRRFVYPLE 290
>AJ224481-1|CAA11970.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 206 bits (503), Expect = 7e-53
Identities = 99/201 (49%), Positives = 141/201 (70%), Gaps = 12/201 (5%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +A ALMTT+ +++CD
Sbjct: 300 VMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCD 359
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP ++TP W YV+Y
Sbjct: 360 HGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDY 419
Query: 254 N----------VKKEPE-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDS 111
+ V K P+ + + RKR + + + E P + + +K+E + +
Sbjct: 420 SESAKKEVVAEVVKAPQVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKKSKKDKKA 479
Query: 110 EAPAEADATMDTSESPETAEQ 48
+A E+ A +S T ++
Sbjct: 480 KAGLESGAEPGDGDSDTTKKK 500
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D+LDAQW Y+ HKDE+Y RRV+ L+
Sbjct: 265 DVLDAQWLYDNHKDESYLRRVVYPLE 290
>AF067023-1|AAD20232.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 206 bits (503), Expect = 7e-53
Identities = 99/201 (49%), Positives = 141/201 (70%), Gaps = 12/201 (5%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +A ALMTT+ +++CD
Sbjct: 300 VMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCD 359
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP ++TP W YV+Y
Sbjct: 360 HGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDY 419
Query: 254 N----------VKKEPE-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDS 111
+ V K P+ + + RKR + + + E P + + +K+E + +
Sbjct: 420 SESAKKEVVAEVVKAPQVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKKSKKDKKA 479
Query: 110 EAPAEADATMDTSESPETAEQ 48
+A E+ A +S T ++
Sbjct: 480 KAGLESGAEPGDGDSDTTKKK 500
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D+LDAQW Y+ HKDE+Y RRV+ L+
Sbjct: 265 DVLDAQWLYDNHKDESYLRRVVYPLE 290
>AF067008-1|AAD11815.1| 514|Homo sapiens dyskerin protein.
Length = 514
Score = 206 bits (503), Expect = 7e-53
Identities = 99/201 (49%), Positives = 141/201 (70%), Gaps = 12/201 (5%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +A ALMTT+ +++CD
Sbjct: 300 VMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCD 359
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP ++TP W YV+Y
Sbjct: 360 HGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDY 419
Query: 254 N----------VKKEPE-NGDGVEEGSRKRTASTANAEDPDVSIE-VKQEXXXXXXKRDS 111
+ V K P+ + + RKR + + + E P + + +K+E + +
Sbjct: 420 SESAKKEVVAEVVKAPQVVAEAAKTAKRKRESESESDETPPAAPQLIKKEKKKSKKDKKA 479
Query: 110 EAPAEADATMDTSESPETAEQ 48
+A E+ A +S T ++
Sbjct: 480 KAGLESGAEPGDGDSDTTKKK 500
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D+LDAQW Y+ HKDE+Y RRV+ L+
Sbjct: 265 DVLDAQWLYDNHKDESYLRRVVYPLE 290
>AJ010395-1|CAB51168.1| 524|Homo sapiens dyskerin protein.
Length = 524
Score = 202 bits (493), Expect = 1e-51
Identities = 87/127 (68%), Positives = 112/127 (88%), Gaps = 2/127 (1%)
Frame = -1
Query: 614 IIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAFALMTTSTMASCD 435
++KDSAVNA+ YGAK++LPG+LRYEDGIEV+QEIV++TTKGEA+ +A ALMTT+ +++CD
Sbjct: 300 VMKDSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCD 359
Query: 434 HGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSYVNY 255
HG+ AK+KRVIMERDTYPRKWGLGPKASQKK++I+QG LDK+GKP ++TP W YV+Y
Sbjct: 360 HGIVAKIKRVIMERDTYPRKWGLGPKASQKKLMIKQGLLDKHGKPTDSTPATWKQEYVDY 419
Query: 254 --NVKKE 240
+ KKE
Sbjct: 420 SESAKKE 426
Score = 43.6 bits (98), Expect = 8e-04
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 717 DILDAQWXYETHKDETYXRRVIXXLK 640
D+LDAQW Y+ HKDE+Y RRV+ L+
Sbjct: 265 DVLDAQWLYDNHKDESYLRRVVYPLE 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,240,854
Number of Sequences: 237096
Number of extensions: 1790064
Number of successful extensions: 4221
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4219
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -