Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_O19
(831 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 6e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.001
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.004
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.009
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 35 0.012
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.087
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 31 0.20
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.26
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.4
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 5.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 7.5
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 25 10.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.5 bits (88), Expect = 6e-04
Identities = 25/66 (37%), Positives = 27/66 (40%)
Frame = +2
Query: 506 PPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXX 685
PP PS PP+ PP+ PS P P A PP P A P PP
Sbjct: 420 PPSLPPSAPPSLPPSAP--PSLPM-GAPAAPPLPPSAPIAPPLPAGMPAAPP--LPPAAP 474
Query: 686 APPPXP 703
APPP P
Sbjct: 475 APPPAP 480
Score = 38.3 bits (85), Expect = 0.001
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = +2
Query: 506 PPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXX 685
PP PS PP+ PP+ P P A P P P P A PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA---PAPPPAP 480
Query: 686 APPPXPP 706
AP P P
Sbjct: 481 APAPAAP 487
Score = 35.9 bits (79), Expect = 0.007
Identities = 23/85 (27%), Positives = 27/85 (31%), Gaps = 1/85 (1%)
Frame = +2
Query: 509 PPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXA 688
PP S PP PP P + PP P P ALP +
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 689 PPPXP-PXXIXASRXXPRPXXAXPA 760
PP P P + S P A P+
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPS 438
Score = 34.3 bits (75), Expect = 0.022
Identities = 29/102 (28%), Positives = 29/102 (28%)
Frame = +3
Query: 501 APPPLXXXXXXXXXXXRGWXXXXXPPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPX 680
APPP G PP P P LPP PP P P
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPV-PTPPSLPPSAPPSLPPSAPPSLPM--GAPAA 446
Query: 681 XALPPXXPRXXSXPXXXXPXXXXXXPXPPAXXPPLPXPPGTP 806
LPP P P P PPA P P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAP----PLPPAAPAPPPAPAPAP 484
Score = 33.1 bits (72), Expect = 0.050
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Frame = +2
Query: 509 PPXXPSXPPAXPPAXXXVPS----XPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPP 676
PP PS P + PP VPS P P P + P PP P P P
Sbjct: 230 PPIPPSIPSSRPP--ERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAI--- 284
Query: 677 XXXAPPPXPP 706
+ PP PP
Sbjct: 285 NSTSKPPLPP 294
Score = 32.7 bits (71), Expect = 0.066
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Frame = +2
Query: 500 RAPPPXXPSXPPAXPPAXXXVPSXP-XPXXPRAXXXXXP---PXXXPPXPXXPXXALPRX 667
R P P+ PP PP+ V S P P P A P PP P
Sbjct: 244 RVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAA 303
Query: 668 XPPXXXAPPPXPP 706
PPP PP
Sbjct: 304 LAANKKRPPPPPP 316
Score = 32.3 bits (70), Expect = 0.087
Identities = 29/97 (29%), Positives = 31/97 (31%), Gaps = 11/97 (11%)
Frame = +2
Query: 503 APPPXXPSXP-PAXPP----AXXXVPSXPXPXX-PRAXXXXXPPXXXPPXPXXPXXALPR 664
APPP P PA PP + P P P P + PP P P A P
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Query: 665 XX-----PPXXXAPPPXPPXXIXASRXXPRPXXAXPA 760
PP P PP A P P A A
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Score = 31.5 bits (68), Expect = 0.15
Identities = 22/69 (31%), Positives = 23/69 (33%)
Frame = +2
Query: 500 RAPPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPX 679
R PPP S + PPA P P P PP P P PP
Sbjct: 374 RQPPPLSSSRAVSNPPA-------PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP- 425
Query: 680 XXAPPPXPP 706
APP PP
Sbjct: 426 -SAPPSLPP 433
Score = 30.3 bits (65), Expect = 0.35
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 530 PPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXAPPPXPP 706
PP PP S P P R+ PP P P APPP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +2
Query: 530 PPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXAPPPXPPX 709
PP PP P + PP PP P P APPP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPP---PPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 710 XIXASRXXPRP 742
++ P P
Sbjct: 368 SAPSTGRQPPP 378
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/95 (28%), Positives = 30/95 (31%), Gaps = 4/95 (4%)
Frame = +2
Query: 500 RAPPPXXPSXPPAXPPAXXXVPSX----PXPXXPRAXXXXXPPXXXPPXPXXPXXALPRX 667
R PPP PS P S P P PR+ P P P PR
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPPPPPPRS 368
Query: 668 XPPXXXAPPPXPPXXIXASRXXPRPXXAXPAXXRR 772
P PPP + +SR P PA R
Sbjct: 369 APSTGRQPPP-----LSSSRAVSNPPAPPPAIPGR 398
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +3
Query: 576 PPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXX 755
PP P P PP PP P PP A P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIA---PPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Query: 756 PXPPAXXPPLPXPPG 800
P A LP G
Sbjct: 485 AAPVASIAELPQQDG 499
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/74 (27%), Positives = 24/74 (32%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXX 752
PP P P+ PP PP P +PP P + P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 753 XPXPPAXXPPLPXP 794
P P A PP+P P
Sbjct: 1229 VPVPTAKAPPVPAP 1242
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/77 (24%), Positives = 23/77 (29%)
Frame = +3
Query: 576 PPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXX 755
PP P+ PP P + P PP + P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 756 PXPPAXXPPLPXPPGTP 806
P P PP+P P G P
Sbjct: 1143 PKPSVAAPPVPAPSGAP 1159
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXX 752
PP P P PP P + PP PP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 753 XPXPPAXXPPLPXP 794
P P A PP+P P
Sbjct: 1219 VPTPSAGLPPVPVP 1232
Score = 35.9 bits (79), Expect = 0.007
Identities = 28/96 (29%), Positives = 33/96 (34%), Gaps = 2/96 (2%)
Frame = +2
Query: 503 APPPXXPSXPPAXPPAXXXVPSXPXP-XXPRAXXXXXP-PXXXPPXPXXPXXALPRXXPP 676
APP P+ P P + PS P P P + P P PP P +P P
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP--APSGIPPVPKP 1097
Query: 677 XXXAPPPXPPXXIXASRXXPRPXXAXPAXXRRXXSP 784
APP P A P P A P +P
Sbjct: 1098 SVAAPPVPKPS--VAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 35.9 bits (79), Expect = 0.007
Identities = 26/85 (30%), Positives = 28/85 (32%)
Frame = +2
Query: 503 APPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXX 682
APP PS PA P P P A P PP P P +P PP
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVA-APPVPAPSSGIPPVPK-PAAGVPPVPPPSE 1196
Query: 683 XAPPPXPPXXIXASRXXPRPXXAXP 757
P P P + P P A P
Sbjct: 1197 APPVPKPSVGVP---PVPPPSTAPP 1218
Score = 35.5 bits (78), Expect = 0.009
Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 5/91 (5%)
Frame = +2
Query: 503 APPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXX 682
APP PS A PP P P A PP P P +P PP
Sbjct: 1158 APPVPKPSV--AAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Query: 683 XAPPP-----XPPXXIXASRXXPRPXXAXPA 760
P P PP + ++ P P + A
Sbjct: 1216 APPVPTPSAGLPPVPVPTAKAPPVPAPSSEA 1246
Score = 35.5 bits (78), Expect = 0.009
Identities = 30/93 (32%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
Frame = +2
Query: 503 APPPXXPSX--PPAXPPAXXXVPSXP---XPXXPR---AXXXXXPPXXXPPXPXXPXXAL 658
APP PS PP PA P P P P+ PP PP P P L
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP-TPSAGL 1226
Query: 659 PRXXPPXXXAPPPXPPXXIXASRXXPRPXXAXP 757
P P APP P S PR P
Sbjct: 1227 PPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 34.7 bits (76), Expect = 0.016
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXX 752
P P P PPP P + P PP P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 753 XPXPPAXXPPLPXPPGTP 806
P P PP+P P G P
Sbjct: 1104 VPKPSVAVPPVPAPSGAP 1121
Score = 34.7 bits (76), Expect = 0.016
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXX 752
PP P P PP P P +PP P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 753 XPXPPAXXPPLPXPPGTP 806
P P PP+P P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAP 1217
Score = 33.5 bits (73), Expect = 0.038
Identities = 18/73 (24%), Positives = 22/73 (30%)
Frame = +3
Query: 576 PPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXX 755
PP P+ PP P + P A P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 756 PXPPAXXPPLPXP 794
PP+ PP+P P
Sbjct: 1210 VPPPSTAPPVPTP 1222
Score = 32.7 bits (71), Expect = 0.066
Identities = 26/94 (27%), Positives = 30/94 (31%), Gaps = 8/94 (8%)
Frame = +2
Query: 500 RAPPPXXPSXPPAXPPAXXXVPSXPXPXX--PRAXXXXXPPXXXPPXPXXPXXALPRXXP 673
+APP PS P P P P P P PP P P +P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPA-PSSEIPSIPA 1078
Query: 674 PXXXAPPPXP------PXXIXASRXXPRPXXAXP 757
P P P P P A+ P+P A P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112
Score = 32.7 bits (71), Expect = 0.066
Identities = 20/78 (25%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +3
Query: 576 PPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXX 755
PP P+ PP P P A PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 756 PXPPAXXPPLPXPP-GTP 806
PP+ PP+P P G P
Sbjct: 1191 VPPPSEAPPVPKPSVGVP 1208
Score = 32.3 bits (70), Expect = 0.087
Identities = 25/85 (29%), Positives = 27/85 (31%)
Frame = +2
Query: 503 APPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXX 682
APP PS A PP + P P A P PP P A P P
Sbjct: 1120 APPVPKPSV--AAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 683 XAPPPXPPXXIXASRXXPRPXXAXP 757
P P P + P P A P
Sbjct: 1178 IPPVPKPAAGVP---PVPPPSEAPP 1199
Score = 32.3 bits (70), Expect = 0.087
Identities = 20/78 (25%), Positives = 22/78 (28%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXX 752
PP P P PP P P A P P + P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 753 XPXPPAXXPPLPXPPGTP 806
P P A PP+P P P
Sbjct: 1181 VPKPAAGVPPVPPPSEAP 1198
Score = 31.5 bits (68), Expect = 0.15
Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +2
Query: 503 APPPXXPSXPPAXPPAXXXVPSXPXPXX---PRAXXXXXPPXXXPPXPXXPXXALPRXXP 673
APP PS PA P P P P PP P P A P P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA-PSGAP 1159
Query: 674 PXXXAPPPXPPXXIXASRXXPRPXXA 751
P PP +S P P A
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Score = 30.3 bits (65), Expect = 0.35
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 7/98 (7%)
Frame = +2
Query: 512 PXXPSXPPAXP-PAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXA 688
P P+ A P PA +P P P A P PP P P A P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVA-APPVPKPSVAVPPVPA-PSGAPPVPKPSVAAP 1131
Query: 689 PPPXP------PXXIXASRXXPRPXXAXPAXXRRXXSP 784
P P P P A+ P P A P +P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Score = 30.3 bits (65), Expect = 0.35
Identities = 19/78 (24%), Positives = 23/78 (29%), Gaps = 1/78 (1%)
Frame = +3
Query: 576 PPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXX 755
PP P+ PP P P A PP + P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 756 PXPPAXXPPLPXP-PGTP 806
P P + PP+P P G P
Sbjct: 1172 PAPSSGIPPVPKPAAGVP 1189
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/60 (26%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +3
Query: 633 PPXPPXXPXLXXXP--PXXALPPXXPRXXSXPXXXXPXXXXXXPXPPAXXPPLPXPPGTP 806
PP P + P P +PP P P P+ PP+P P TP
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/77 (23%), Positives = 20/77 (25%)
Frame = +3
Query: 576 PPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXX 755
PP P P+ PP PP P LPP P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Query: 756 PXPPAXXPPLPXPPGTP 806
P P P +P
Sbjct: 1249 VSTPRSSVPSPHSNASP 1265
Score = 27.1 bits (57), Expect = 3.3
Identities = 27/94 (28%), Positives = 31/94 (32%), Gaps = 11/94 (11%)
Frame = +2
Query: 509 PPXXP-SXPPAXPPAXXXVPSXPXP-XXPRAXXXXXPPXXXPPXP---XXPXXALPRXXP 673
PP P S P + PA P P +A P PP P P +P P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 674 P----XXXAPPPXPPXXIXASR--XXPRPXXAXP 757
P AP PP +S P P A P
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP 1084
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.7 bits (81), Expect = 0.004
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 6/72 (8%)
Frame = +2
Query: 509 PPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXA-----LPRXXP 673
PP PS P A PP VP P P A P PP P P P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGP 243
Query: 674 PXXXAP-PPXPP 706
A PP PP
Sbjct: 244 SIPSASVPPVPP 255
Score = 36.3 bits (80), Expect = 0.005
Identities = 22/82 (26%), Positives = 26/82 (31%)
Frame = +2
Query: 512 PXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXAP 691
P PS PP P + +PS P P P P +LP PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP--SLPSAVPPMPPKV 201
Query: 692 PPXPPXXIXASRXXPRPXXAXP 757
PP P + RP P
Sbjct: 202 PPPPLSQAPVANTSSRPSSFAP 223
Score = 31.1 bits (67), Expect = 0.20
Identities = 20/77 (25%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXXPP--XXALPPXXPRXXSXPXXXXPXXX 746
P P P +PPP P P + P +LPP P + P P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP--PAQPAAPVKSPPSAP 188
Query: 747 XXXPXPPAXXPPLPXPP 797
P P +P PP
Sbjct: 189 SLPSAVPPMPPKVPPPP 205
Score = 31.1 bits (67), Expect = 0.20
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +2
Query: 506 PPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALP-RXXPPXX 682
PPP P+ P PP+ +PS P P+ PP P + P PP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKV-----PPPPLSQAPVANTSSRPSSFAPPAG 226
Query: 683 XAP 691
AP
Sbjct: 227 HAP 229
Score = 30.7 bits (66), Expect = 0.26
Identities = 23/87 (26%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLP---PPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXX 743
PPP P P LP PP PP P A P + P P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNV 231
Query: 744 XXXXPXPPAXXPPLP---XPPGTPXXF 815
P P P +P PP P +
Sbjct: 232 TSESPKFPNRGPSIPSASVPPVPPSSY 258
Score = 27.5 bits (58), Expect = 2.5
Identities = 21/85 (24%), Positives = 23/85 (27%)
Frame = +2
Query: 503 APPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXX 682
A PP P+ P + P P P PP P P P P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP-IPSKAPPIPSSLPPPAQPAAP 180
Query: 683 XAPPPXPPXXIXASRXXPRPXXAXP 757
PP P S P P P
Sbjct: 181 VKSPPSAPS--LPSAVPPMPPKVPP 203
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/45 (26%), Positives = 15/45 (33%)
Frame = +3
Query: 672 PPXXALPPXXPRXXSXPXXXXPXXXXXXPXPPAXXPPLPXPPGTP 806
PP ++PP P P P P P+ PP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.5 bits (78), Expect = 0.009
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Frame = -3
Query: 676 GGXXSRXGXXGGXGGGR---XXXRGXXXXXGXGXXGGGXXXXXXPRG--GGGXGGXGXXR 512
GG G GG GGR RG G G GG RG GG GG G +
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 511 GG 506
GG
Sbjct: 69 GG 70
Score = 34.7 bits (76), Expect = 0.016
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -3
Query: 655 GXXGGXGGGRXXXRGXXXXXGXGXXGGGXXXXXXPRGG-GGXGGXGXXRGGGA 500
G GG GGR G G G G RGG GG GG RGG +
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSS 61
Score = 33.9 bits (74), Expect = 0.028
Identities = 29/69 (42%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -3
Query: 706 RGXXGGSAXXGGXXSRXGXXGGXGGGRXXXRGXXXXXGXGXXGGGXXXXXXPRGGGGX-- 533
RG GGS GG G GG GGGR RG G G GG RGG G
Sbjct: 8 RGGRGGSR--GGRGGFNGGRGGFGGGRGGARGG----GRGGARGG-------RGGRGGAR 54
Query: 532 GGXGXXRGG 506
GG G GG
Sbjct: 55 GGRGGSSGG 63
Score = 30.3 bits (65), Expect = 0.35
Identities = 22/66 (33%), Positives = 23/66 (34%)
Frame = -1
Query: 768 RXXAGXAXXGRGXXREAXIXXGGXGGGAXHXGGXXRGRAXXGXXGXGGXXXGGXXXXXAR 589
R G + GRG GG GGA G RG A G G GG G R
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGAR---GGGRGGARGGRGGRGGARGGRGGSSGGR 64
Query: 588 GXXGXG 571
G G
Sbjct: 65 GGAKGG 70
Score = 27.5 bits (58), Expect = 2.5
Identities = 21/51 (41%), Positives = 22/51 (43%)
Frame = -3
Query: 793 GXGRGGXXAGGXGXXXXXXGXXXXGXDXXRGXXGGSAXXGGXXSRXGXXGG 641
G GRGG GG G G G RG GGS+ GG R G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRG----GRGGARGGRGGSS--GG---RGGAKGG 70
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 35.1 bits (77), Expect = 0.012
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = -3
Query: 655 GXXGGXGGGRXXXRGXXXXXGXGXXGGGXXXXXXPRGGGGXGGXGXXRGG 506
G GG GGR RG G GGG RGG G G G RGG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGG------SRGGFGGGSRGGSRGG 181
Score = 25.4 bits (53), Expect = 10.0
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -1
Query: 654 AXXGXXGXGGXXXGGXXXXXARGXXGXGXXGTXXXAGGXAGGXEGX*GGGAR 499
A G G GG GG G G GG GG G GG+R
Sbjct: 130 ARNGPAGRGGR--GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSR 179
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.087
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +2
Query: 512 PXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXAP 691
P P P P P P P PP PP P P A P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 692 PPXP 703
P P
Sbjct: 1743 VPNP 1746
Score = 32.3 bits (70), Expect = 0.087
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +2
Query: 563 PSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXX--PPXXXAPPPXPPXXIXAS 724
P+ P P PP P P P ++P PP PP PP + AS
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 31.1 bits (67), Expect = 0.20
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2
Query: 506 PPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXP 613
PPP PP+ PP PS P P P + P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/55 (25%), Positives = 16/55 (29%)
Frame = +3
Query: 633 PPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXXPXPPAXXPPLPXPP 797
PP P P P PP + P P P+ PP P P
Sbjct: 1486 PPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHP 1540
Score = 25.4 bits (53), Expect = 10.0
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +2
Query: 542 PPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXP 646
PP VP+ P P P + PP P P
Sbjct: 1355 PPVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMP 1389
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 690 PPXXPRXXSXPXXXXPXXXXXXPXPPAXXPPLPXPPGTP 806
PP P+ + P P P PP PP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTP----PPPPMSVPPPPSAPPMP 1724
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 31.1 bits (67), Expect = 0.20
Identities = 24/86 (27%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Frame = +2
Query: 506 PPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPP-XPXXPXXALPRXXPPXX 682
PP P+ A P+ VPS P P P PP P P P P
Sbjct: 461 PPWQQPTQQSAVQPSNL-VPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAP-GMPNLN 518
Query: 683 XAPPPXPPXXIXASRXXPRPXXAXPA 760
+ PP P + P P PA
Sbjct: 519 MSQPPMVPPGMALPPGMPAPFPGYPA 544
Score = 25.8 bits (54), Expect = 7.5
Identities = 22/86 (25%), Positives = 24/86 (27%), Gaps = 1/86 (1%)
Frame = +3
Query: 573 PPPXXPXPXXXXXPRXXXLPPPXPPXXPXLXXX-PPXXALPPXXPRXXSXPXXXXPXXXX 749
PP P P +P P P PP PP P P
Sbjct: 461 PPWQQPTQQSAVQPSNL-VPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNM 519
Query: 750 XXPXPPAXXPPLPXPPGTPXXFXXXP 827
P P P + PPG P F P
Sbjct: 520 SQP--PMVPPGMALPPGMPAPFPGYP 543
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.26
Identities = 17/66 (25%), Positives = 19/66 (28%)
Frame = +3
Query: 630 PPPXPPXXPXLXXXPPXXALPPXXPRXXSXPXXXXPXXXXXXPXPPAXXPPLPXPPGTPX 809
PPP PP P +PP P P P PP PP G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 810 XFXXXP 827
+ P
Sbjct: 792 YYAPAP 797
Score = 29.9 bits (64), Expect = 0.46
Identities = 25/79 (31%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Frame = +2
Query: 524 SXPPAXPPAXXXVPSX-PXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXAPPPX 700
S PP P P+ P P P A PP PP P P PP PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP-PPPPGVAGAGPP---PP----PPPP 782
Query: 701 PPXXIXASRXXPRPXXAXP 757
P SR A P
Sbjct: 783 PAVSAGGSRYYAPAPQAEP 801
Score = 29.9 bits (64), Expect = 0.46
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +2
Query: 611 PPXXXPPXPXXPXXALPRXXPPXXXAPPPXPPXXIXASRXXPRPXXAXPA 760
PP P P +P P PPP PP + A P P PA
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGV-AGAGPPPPPPPPPA 784
Score = 29.1 bits (62), Expect = 0.81
Identities = 18/72 (25%), Positives = 20/72 (27%), Gaps = 4/72 (5%)
Frame = +2
Query: 503 APPPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPP-- 676
+P P P + P P P P P P P P PP
Sbjct: 709 SPSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Query: 677 --XXXAPPPXPP 706
PPP PP
Sbjct: 769 GVAGAGPPPPPP 780
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = +2
Query: 509 PPXXPSXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXA 688
P P+ P PPA + P P P PP PP P P
Sbjct: 742 PTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAE 800
Query: 689 PPP 697
P P
Sbjct: 801 PEP 803
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +2
Query: 524 SXPPAXPPAXXXVPSXPXPXXPRAXXXXXPPXXXPPXPXXPXXALPRXXPPXXXAPPPXP 703
S P + P+ V + P P + PP PP P +LP P PPP P
Sbjct: 141 SAPASQEPSASGV-NAPTVSAPNSMVSP-PPSFQPPSAAAPATSLPSDYNP--PPPPPPP 196
Query: 704 P 706
P
Sbjct: 197 P 197
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 5.7
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -3
Query: 646 GGXGGGRXXXRGXXXXXGXGXXGGGXXXXXXPRGGGGXGGXGXXRGGGA 500
GG GGR G G G GGG RG GG RG A
Sbjct: 447 GGSRGGRGGFGGRGGFGGRGGFGGGRG-----RGRGGARSGNPNRGSVA 490
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 509 PPXXPSXPPAXPPAXXXVPSXPXPXXP 589
PP P PP PP PS P P P
Sbjct: 5 PPGNPPPPP--PPPGFEPPSQPPPPPP 29
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 611 PPXXXPPXPXXPXXALPRXXPPXXXAPPP 697
PP PP P P P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP---PPPP 30
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 25.4 bits (53), Expect = 10.0
Identities = 25/91 (27%), Positives = 25/91 (27%), Gaps = 7/91 (7%)
Frame = -1
Query: 756 GXAXXGRGXXREAXIXXGGXGGGAXHXGGXXR-------GRAXXGXXGXGGXXXGGXXXX 598
G G G R GG GG G A G G GG G
Sbjct: 91 GFPGAGPGGARTFHFNMGGPGGAQFFSASDPNDIFERVFGHAFAGGGGMGGGMGGMGGMD 150
Query: 597 XARGXXGXGXXGTXXXAGGXAGGXEGX*GGG 505
G GT GG GG GGG
Sbjct: 151 DDMDMDGG--FGTRTRGGGMPGGFANMFGGG 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,388,847
Number of Sequences: 5004
Number of extensions: 18453
Number of successful extensions: 309
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 408446760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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