Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_O16
         (936 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0178 + 1386981-1387505                                           28   9.3  

>06_01_0178 + 1386981-1387505
          Length = 174

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 26/109 (23%), Positives = 27/109 (24%)
 Frame = -3

Query: 694 PGSGXTXAHXGXXGRXXXEARESXXXXGXXGXXSPRWXDAAXXXXDGEXXXHGSCXRGXX 515
           PG        G  GR            G  G        A      G    HG    G  
Sbjct: 15  PGQPGGRGRGGRGGRGGRGGASGGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGG 74

Query: 514 GRAXXGNXXX*XXXRXGGXXXGXXRGXXGGGAGXRGRXXPEXXTXGEXG 368
           G    G        R GG       G  GGG G +GR        G  G
Sbjct: 75  GGGGKG--------RKGGAGGHGGAGGGGGGGGGKGRKGGRGGDGGSGG 115


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,714,298
Number of Sequences: 37544
Number of extensions: 155331
Number of successful extensions: 398
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)