Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_O16
         (936 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    24   1.7  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    22   9.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   9.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 312 SLISNLXNTCDLTPLPEWSCEQSAWWGACGRVL 214
           SL +N   +  LTP P W+  ++   GACG  +
Sbjct: 98  SLDTNRGGSPKLTPYPNWAQNKA---GACGSAI 127


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 520 SRAXSSRXLXXPHPXPPXPR 579
           ++  ++R +  P P PP PR
Sbjct: 263 AKPGNNRPVYIPQPRPPHPR 282


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 532 SSRXLXXPHPXPPXPR 579
           ++R +  P P PP PR
Sbjct: 44  NNRPIYIPQPRPPHPR 59



 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 532 SSRXLXXPHPXPPXPR 579
           ++R +  P P PP PR
Sbjct: 72  NNRPIYIPQPRPPHPR 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,472
Number of Sequences: 438
Number of extensions: 1330
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)