Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_O15
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0544 - 23768808-23768910,23769005-23769030,23769379-237694...    31   0.77 
07_03_1107 - 24024387-24024497,24025799-24026410                       29   3.1  
09_02_0618 + 11267444-11267652,11268345-11268399,11269554-11270138     29   4.1  
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402...    29   4.1  
01_05_0440 + 22203688-22203832,22203912-22204078                       29   4.1  
05_02_0122 - 6840840-6841307                                           29   5.4  
07_01_0130 - 963856-965454                                             28   7.2  

>02_04_0544 -
           23768808-23768910,23769005-23769030,23769379-23769497,
           23769542-23769668,23769842-23769905,23769981-23770095,
           23770867-23771101,23771196-23771382,23771948-23772305,
           23772432-23772465
          Length = 455

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 98  PTTPTAVKPPRVGPKTSLNHSIGSSDG-RCVQRAGT*STRAYDSRLLGIPR 247
           P  PT   PP   PKT+ + +  SSDG R +    + S   YD R L + R
Sbjct: 24  PPYPTGSAPPVRLPKTACSATYFSSDGSRLLATVASASATVYDCRTLSVVR 74


>07_03_1107 - 24024387-24024497,24025799-24026410
          Length = 240

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 266 KPQSPARRSFSGLPGPLGQGEHADSFXC 349
           K ++PA  S +  PGP G G  ADS  C
Sbjct: 179 KAKAPAASSTADAPGPAGDGVAADSTAC 206


>09_02_0618 + 11267444-11267652,11268345-11268399,11269554-11270138
          Length = 282

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -3

Query: 297 LKLLR--AGDWGLQLSPIXRGIPSKRES*ARVDYVPALCTHRPSLLPIE*FSEVFGPT 130
           ++LLR  A D G++  P+      KR+S A   Y P  C H   ++ I   S+ FG T
Sbjct: 112 MRLLRFMASDLGVEQEPLLAAFRGKRQSTALHHYPP--CRHPEKVIGIAPHSDGFGLT 167


>01_07_0306 + 42638683-42638990,42639074-42639314,42639935-42640236,
            42640431-42640607,42640853-42641617,42641697-42641791,
            42641889-42641951,42642047-42642135,42642229-42642324,
            42642457-42643104,42643596-42643628,42643838-42643912,
            42644442-42644603,42644604-42644674,42644758-42644815,
            42645196-42645394,42645487-42645552,42645699-42646183
          Length = 1310

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = +3

Query: 249  LWGIIANPNPQHEGVSAGCPGL*ARENMLIPSXVARVRPRTSKGITDXXXXXXXXXEDAG 428
            LW +++ P P+++ +  G PG   R     P  +   R   S+G T          ++  
Sbjct: 1112 LWNVLSAPLPKNDAIDGGLPGSADR-----PKLLKLDRSPLSQGTTKWKKSDRERDQNRD 1166

Query: 429  PSKKNFNTSS 458
             S KN N+ S
Sbjct: 1167 ASLKNSNSKS 1176


>01_05_0440 + 22203688-22203832,22203912-22204078
          Length = 103

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 27/64 (42%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = -3

Query: 702 EGHXPGVEPAA*FDSTRXSHQA---RTPEGLTD*QLFL--DSVGGGAWPFLVGGAICLVN 538
           EGH  GV+ AA   +T  S  A   R   GL D  L L  ++ GGGA   L GG+  L N
Sbjct: 11  EGH--GVDAAAGRAATGLSVDAAVGRAVAGLADGVLGLMYEAQGGGAGEELTGGSDGLAN 68

Query: 537 SGNE 526
            G E
Sbjct: 69  DGEE 72


>05_02_0122 - 6840840-6841307
          Length = 155

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 161 IGSSDGRCVQRAGT*STRAYDSRLLGIPRFMG 256
           +G+  G C     + ++R Y S L+G+PR +G
Sbjct: 109 VGAGGGGCTSSRASITSRVYFSGLIGLPRSIG 140


>07_01_0130 - 963856-965454
          Length = 532

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 558 HQLRTAMHHHPPNQERAVNLSILPVSGPGEIXVLSQIK 671
           H +   +   PPN     NL +LP+ GP ++   + +K
Sbjct: 195 HIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGKSTLVK 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,764,431
Number of Sequences: 37544
Number of extensions: 478315
Number of successful extensions: 1157
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)