Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_O13
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0043 + 790859-790873,791410-791603,792521-792605,792719-79... 33 0.20
11_07_0002 - 27171791-27172222 32 0.60
09_02_0279 + 6702517-6702948 32 0.60
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 31 1.4
01_01_0085 - 639959-640192,640290-640379,640465-640521,640826-64... 31 1.4
07_01_0901 + 7578143-7578327,7578430-7578455,7578576-7578606,757... 30 1.8
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 30 2.4
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 29 4.2
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 29 4.2
11_06_0583 + 25213680-25213827,25213920-25214335 29 5.6
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 29 5.6
05_04_0320 + 20181560-20182063,20182513-20182853,20183159-201838... 29 5.6
11_08_0092 - 28307180-28307380,28307471-28307936,28308008-283081... 28 7.4
09_06_0081 + 20745627-20748144,20748211-20748308 28 7.4
09_04_0025 - 13882424-13882657 28 9.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 9.7
03_04_0204 - 18444903-18445054,18445445-18445676,18445765-184458... 28 9.7
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216... 28 9.7
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482... 28 9.7
>09_01_0043 +
790859-790873,791410-791603,792521-792605,792719-793075
Length = 216
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1
Query: 406 QAGSGPAGCSGTPAAPSGRPDGLPCRDG 323
++GSG AGC G+ A GR DG RDG
Sbjct: 118 RSGSGKAGCVGSRADQDGRLDGREVRDG 145
>11_07_0002 - 27171791-27172222
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 436 RSTVYRVPTRQAGSGPAGCSGTPAAPSGRPDG----LPCRDGRRF 314
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>09_02_0279 + 6702517-6702948
Length = 143
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 436 RSTVYRVPTRQAGSGPAGCSGTPAAPSGRPDG----LPCRDGRRF 314
RS+ + +AGS PAG G+PA G P G P GR F
Sbjct: 55 RSSAASTSSARAGSTPAGVRGSPAGAGGSPGGGSGSTPVGGGRSF 99
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 222 PTSSGFWPRRGSDVGCKSAEESFG-GWALKSLGPRSAHNTMQIVESHIPRA 73
P SSG W RRG +V C++A+ G S+ R N + +H +A
Sbjct: 60 PASSGRWRRRGLEVVCEAAKTGTATGRRPDSVKKRERQNDRHRIRNHARKA 110
>01_01_0085 -
639959-640192,640290-640379,640465-640521,640826-640858,
640972-641046,641141-641230,641343-641444,641643-641713,
642243-642396,642497-642573,643077-643113
Length = 339
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = -2
Query: 318 VSEPSIRLEGSVGWASLG*AAPSGCSVDRGSPPTSSGFWPRRGSDVGCKSAEESFGGWAL 139
VS S EGS + S+ GSP +S+G G+ G ++ FGG L
Sbjct: 269 VSRTSSCREGSGRFQEQRSVVTRTSSIREGSPESSNGASSSTGASTGTNTSTSRFGGLRL 328
Query: 138 KSLG 127
LG
Sbjct: 329 PGLG 332
>07_01_0901 +
7578143-7578327,7578430-7578455,7578576-7578606,
7578690-7578777,7578889-7579034,7579641-7579685,
7579776-7579879,7579976-7580112,7580553-7580654,
7581375-7581587
Length = 358
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 210 GFWPRRGSDVGCKSAEESFGGWALKSLGPRS 118
G WPRR +D+G ++ S G GPRS
Sbjct: 10 GPWPRRAADLGVAQSQRSPAGGKKSRRGPRS 40
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 60 RANGARGVCETQRSAWCCEQTAGPRISEPTHQTTPLHS--YTRRPIPSEARTRMR*GGY 230
R +G+RG QR + PR S P +P S Y+R P P AR RMR Y
Sbjct: 132 RISGSRGRSYDQR------YSRSPRYSPPPRGRSPYRSPSYSRSPSPRYARRRMRERSY 184
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 183 RPIPSEARTRMR*GGYRGQHYNQTARLTPR 272
R PSE R+R R G RG+ Y+Q +PR
Sbjct: 121 RKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 406 QAGSGPAGCSGTPAAPSGRPDGLPCRDG 323
++GSG GC G+ A GR G RDG
Sbjct: 213 RSGSGKGGCVGSRADQDGRIGGREVRDG 240
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
Frame = -2
Query: 225 PPTSSGFW--PRRGSDVGCKSAE----ESFGGWALKSLGP-RSAHNTMQIVESHIPRAPH 67
PPTSS +W G+ SA S WA P R+ T I APH
Sbjct: 317 PPTSSSYWLSAADGATAAAPSARTHGARSHRSWAWALASPMRALRPTSSSSSKSIMAAPH 376
Query: 66 LRGDLVGGSAL 34
RG + G +
Sbjct: 377 NRGGVSGNGGM 387
>11_06_0583 + 25213680-25213827,25213920-25214335
Length = 187
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 445 WSDRSTVYRVPTRQAGSGPAGCSGTPAAPSG 353
W +ST+ +P R+A + AG G P A G
Sbjct: 14 WWPKSTICGIPRRKAAATAAGDGGRPMAADG 44
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 141 EPTHQTTPLHSYTRRPIPSEARTRMR*GGYRGQHYN 248
+P HQ P H Y ++ P GG+RGQ+YN
Sbjct: 823 QPPHQQPPNHDYGQQAYP---------GGWRGQYYN 849
>05_04_0320 +
20181560-20182063,20182513-20182853,20183159-20183819,
20183954-20184112
Length = 554
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 207 FWPRRGSD-VGCKSAEESFGGWALKSLGPRSAHNTMQIVESHIPR 76
F PRR D VG K + SFGG +G A+ ++ + SH+ R
Sbjct: 431 FGPRREEDKVGGKFSYTSFGGGRNSCVGENYAYMQIKAIWSHLLR 475
>11_08_0092 -
28307180-28307380,28307471-28307936,28308008-28308117,
28308206-28308493,28309024-28309059
Length = 366
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 155 NDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPS 295
ND A H D + G+ PD QP A P+D QP PS
Sbjct: 180 NDLDAGRH---DAVHGEQPDGERDADEHRGQPHQRAAPRDVQPPSPS 223
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 412 TRQAGSGPAGCSGTPAAPSGRPDGLP 335
T +A + PA + PAAP P GLP
Sbjct: 715 TPRAPTPPAAAAAAPAAPPALPSGLP 740
>09_04_0025 - 13882424-13882657
Length = 77
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 418 VPTRQAGSGPAGCSGTPAAPSGRPDGLP 335
V +A SGP+GCS P SGRP P
Sbjct: 48 VSVSKASSGPSGCSNDPHI-SGRPCAPP 74
>08_01_0003 +
30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 161 SSALLHPTSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSA 334
SS LLH T L QNPD+ + L + K T+ + +EG ++A+ A
Sbjct: 645 SSKLLHQTPGNLHSQNPDD--SEKNALLSKSENSKAKTKSGTQITATVEGRISTAMQA 700
>03_04_0204 -
18444903-18445054,18445445-18445676,18445765-18445836,
18446201-18446347,18446559-18446614,18446727-18446832,
18446938-18447025,18447112-18447230,18448975-18449580,
18449803-18449898,18450232-18450422,18453287-18453416,
18453531-18453566
Length = 676
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +2
Query: 143 AHPPNDSSA----LLHP-TSDPLRGQNPDEVGGLPRSTLQPDGAAHPKDAQPTEPSRRIE 307
+HP N SA HP TS P+ G N LPR P P+ A ++ + ++
Sbjct: 251 SHPHNIQSAPGQATQHPQTSLPVLGSNNIHARPLPRPVGGPIVPLRPQMADSSQRGQLVQ 310
Query: 308 GSETSAVSA 334
G+ TS +
Sbjct: 311 GAVTSVTGS 319
>02_05_0665 -
30720842-30721003,30721290-30721448,30721555-30721687,
30722042-30722227,30722377-30722906
Length = 389
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -1
Query: 442 SDRSTVYRVPTRQAGSGPAGCSGTPAAPSGRPDGLPCRDGR 320
S + R +AGSG S +P P+ RP L GR
Sbjct: 10 SPEQPLLRPSAARAGSGSGNLSSSPPPPAARPSRLAALIGR 50
>02_05_0077 +
25645730-25645993,25647172-25647648,25648027-25648237,
25648407-25648564,25648641-25648711,25648829-25648934,
25649008-25649094,25649701-25650252,25650337-25650403,
25650971-25651104,25651175-25651228,25651376-25651472,
25652007-25652212,25652287-25652367,25652543-25652608,
25653025-25653098,25653766-25653871
Length = 936
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 149 PPNDSSALLHPTSDPLRGQNPDEVGGLPRSTLQPD 253
PP SDPL+G E G +P S L PD
Sbjct: 508 PPFTQPVAQLSLSDPLQGSPAREEGEVPESELDPD 542
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,624,061
Number of Sequences: 37544
Number of extensions: 369252
Number of successful extensions: 1421
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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