Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_O04
(791 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 133 8e-31
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 133 8e-31
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 133 8e-31
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 130 7e-30
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 129 1e-29
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast can... 30 8.3
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 8.3
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 224 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 283
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 284 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 343
Query: 308 QKEEL 294
+ +L
Sbjct: 344 RNHKL 348
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 133 bits (321), Expect = 8e-31
Identities = 62/125 (49%), Positives = 81/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 130 bits (313), Expect = 7e-30
Identities = 61/125 (48%), Positives = 80/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IWT+SAF +LD L+G+W+ + K N+NLP KM
Sbjct: 239 PGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPMHKM 298
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + L A
Sbjct: 299 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILCQA 358
Query: 308 QKEEL 294
+ +L
Sbjct: 359 RNHKL 363
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 129 bits (311), Expect = 1e-29
Identities = 60/125 (48%), Positives = 80/125 (64%)
Frame = -1
Query: 668 PGVEXXXXXXXXXXXLAPGGHLGRFVIWTQSAFGRLDPLFGSWKTPSKQKKNFNLPQPKM 489
PG+ LAPGGH+GRF IW +SAF +LD L+G+W+ + K N+NLP +M
Sbjct: 225 PGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPMHEM 284
Query: 488 ANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKAMLKLNPYAAVXEEESYLRAA 309
NTDL+R+LKS EI++ LRAP K++ R K NPL N + MLKLNPYA + LR A
Sbjct: 285 INTDLSRILKSPEIQRALRAPRKKIHRRVLKKNPLKNLRIMLKLNPYAKTMRRNTILRQA 344
Query: 308 QKEEL 294
+ +L
Sbjct: 345 RNHKL 349
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -1
Query: 560 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 426
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 26 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 70
>AF349752-1|AAL83912.1| 1013|Homo sapiens amplified in breast cancer
1 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 8.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 583 LSPHSAGLTPYSGHGRHHRNKRRTSTCPSQRWPTLTSHVFSSLMRSG 443
+ PH A L G G + K ++T P QR P L +F ++M +G
Sbjct: 560 IQPHGAKLLEELGTGLIQQYKPDSTTAPDQRAPVLLVVMFWTMMLNG 606
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.3 bits (65), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -1
Query: 560 DPLFGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAP 426
DPL P ++K + L + ++AN + RL+KSD+++ +P
Sbjct: 771 DPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSDQLKTSSSSP 815
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,190,726
Number of Sequences: 237096
Number of extensions: 1826424
Number of successful extensions: 3610
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3609
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -