Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_O02
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 34 0.13
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 34 0.13
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.22
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.22
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.29
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 31 1.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 1.6
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 30 1.6
U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical pr... 30 2.1
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.6
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 29 3.6
Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical pr... 29 4.8
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 29 4.8
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 29 4.8
AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical ... 29 4.8
AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical pr... 28 6.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81539-2|CAB04390.1| 221|Caenorhabditis elegans Hypothetical pr... 28 8.4
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 28 8.4
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical... 28 8.4
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 8.4
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 28 8.4
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +3
Query: 300 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 479
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 238 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 295
Query: 480 PLXGAG 497
P +G
Sbjct: 296 PKMDSG 301
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +3
Query: 300 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 479
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 213 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 270
Query: 480 PLXGAG 497
P +G
Sbjct: 271 PKMDSG 276
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +3
Query: 300 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 479
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 272 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 329
Query: 480 PLXGAG 497
P +G
Sbjct: 330 PKMDSG 335
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +3
Query: 300 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 479
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 213 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 270
Query: 480 PLXGAG 497
P +G
Sbjct: 271 PKMDSG 276
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +3
Query: 300 IGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRR 479
I PP P P+ GS+ D P S ++ + P ++ HRAPP N R
Sbjct: 272 ISPPGAQPYPLTSPVGSSASDSPPNRSLTMMHNGEKSPDGYDPNIMA--HRAPPPSFNNR 329
Query: 480 PLXGAG 497
P +G
Sbjct: 330 PKMDSG 335
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 211 TRPA*RLPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLP-PGTSSPSHLHD 387
TRPA P R P SG P A P P Y P P SPS+
Sbjct: 332 TRPA-PASQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSP 390
Query: 388 S*GAHQSHSAPPPHRTLVPSTG 453
S A ++S PPP + PS G
Sbjct: 391 SYPAEPAYSVPPPAKPEQPSGG 412
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +1
Query: 193 KFSSRQTRPA*RLPTKPQ--RAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTS 366
K + + A R P+ PQ +APP++ + P A AP A PPQ Y G P G
Sbjct: 580 KMDTSEAATAARPPSTPQAPQAPPVQAAPAPVQAPQAPQA-----PPQAYQGYGGPGGPP 634
Query: 367 SPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRHPAIDGP 483
++ + Q PPP + + + A GP
Sbjct: 635 QQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGP 673
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +1
Query: 193 KFSSRQTRPA*RLPTKPQ--RAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTS 366
K + + A R P+ PQ +APP++ + P A AP A PPQ Y G P G
Sbjct: 580 KMDTSEAATAARPPSTPQAPQAPPVQAAPAPVQAPQAPQA-----PPQAYQGYGGPGGPP 634
Query: 367 SPSHLHDS*GAHQSHSAPPPHRTLVPSTGRPRHPAIDGP 483
++ + Q PPP + + + A GP
Sbjct: 635 QQAYRYPPQQGQQYSPYPPPQQQQQHQAQQAQSQAHYGP 673
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.29
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = +1
Query: 232 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 411
P K PP +G+P A R PP G PP T P L G
Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRR 95
Query: 412 SAPPPHRTLV---PSTGRPRHPAIDG 480
PPP T P TG P+ + +G
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEG 121
Score = 32.3 bits (70), Expect = 0.39
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Frame = +3
Query: 264 AERRPRYRHVRAIGPPSPAPTPMLR-WAGSATGDFFPLSSPRLVRGAPEPQRTTTPQDLS 440
A RRP + G P+P PT + +G P P+ G+P P T PQDLS
Sbjct: 216 ASRRPP-PPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGT-GSPPPPPTGEPQDLS 273
Query: 441 AE---HRAPPXP 467
E R PP P
Sbjct: 274 GEGNASRRPPPP 285
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +1
Query: 232 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 411
P K +PP +G+P A R PP G PP T P L G
Sbjct: 130 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTE-GNASRR 188
Query: 412 SAPPPHRTLV---PSTGRPRHPAIDG 480
PPP T P TG P+ + +G
Sbjct: 189 PPPPPKGTGTPPPPPTGEPQDLSAEG 214
Score = 31.9 bits (69), Expect = 0.51
Identities = 31/112 (27%), Positives = 37/112 (33%)
Frame = +1
Query: 232 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 411
P K +PP +G+P A R PP G PP T P L S + S
Sbjct: 161 PPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDL--SAEGYASR 218
Query: 412 SAPPPHRTLVPSTGRPRHPAIDGPXQEXXXXXXXXXXXXXXXXTNRGPRPPP 567
PPP + TG P P G Q+ P PPP
Sbjct: 219 RPPPPPK----GTGSPTPPP-TGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 265
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = +1
Query: 232 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 411
P K PP +G+P A R PP G PP T P L G
Sbjct: 192 PPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGE-GNASRR 250
Query: 412 SAPPPHRT---LVPSTGRPRHPAIDG 480
PPP T P TG P+ + +G
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEG 276
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = +1
Query: 232 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 411
P K PP +G+P A R PP G PP T P L G
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGE-GNASRR 157
Query: 412 SAPPPHRT---LVPSTGRPRHPAIDG 480
PPP T P TG P+ + +G
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEG 183
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/79 (32%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +1
Query: 232 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 411
PT P P LSG+ + P PP G PP T P L S + S
Sbjct: 230 PTPPPTGEPQDLSGEGNASRRPP-------PPPKGTGSPPPPPTGEPQDL--SGEGNASR 280
Query: 412 SAPPPHR---TLVPSTGRP 459
PPP + T P TG P
Sbjct: 281 RPPPPPKGTGTPPPPTGEP 299
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/86 (30%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Frame = +1
Query: 232 PTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSH 411
P P P LS + G A P PP G PP T P L G
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRP------PPPPKGTGTPPPPPTGEPQDLSGE-GNASRR 126
Query: 412 SAPPPHRT---LVPSTGRPRHPAIDG 480
PPP T P TG P+ + +G
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEG 152
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 288 HVRAIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTT 422
H A+ PSP TP+LR +G+ ++ P+ ++ + ++TT
Sbjct: 94 HALALDGPSPTMTPILRSSGTKNHNYAPIHQSAILLPQYQSRKTT 138
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +1
Query: 229 LPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQS 408
LP R P S P A P R +PP+ G PPG P G
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG--- 807
Query: 409 HSAPP--PHRTLVPSTGRPRHPA 471
PP P R PS G P PA
Sbjct: 808 -MYPPLIPTRVPTPSNGAPEIPA 829
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = +1
Query: 229 LPTKPQRAPPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQS 408
LP R P S P A P R +PP+ G PPG P G
Sbjct: 751 LPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG--- 807
Query: 409 HSAPP--PHRTLVPSTGRPRHPA 471
PP P R PS G P PA
Sbjct: 808 -MYPPLIPTRVPTPSNGAPEIPA 829
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/69 (27%), Positives = 24/69 (34%)
Frame = -2
Query: 656 DGRPASVGHKEDPGLYEEPGMPMNXXXXXXXXXXXXRFVGSEXXXXXXGRKPPPGSXQGP 477
DG+P G K PG+ +PG P G G + PPG P
Sbjct: 175 DGQPGQPGPKGPPGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGAPGEAGPQGPPGQPGTP 234
Query: 476 SIAGXRGRP 450
G G+P
Sbjct: 235 GQNGQPGQP 243
>U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical
protein C49H3.6b protein.
Length = 498
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 297 AIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQ 431
A+ PAP P+ R SAT FP RL R P T P+
Sbjct: 351 AVNRQQPAPPPVARLPNSAT---FPTEKSRLPRAPPPAVTTPVPR 392
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +3
Query: 297 AIGPPSPAPTPMLRWAGSATGDFFPLSSPRLVRGAPEPQRTTTPQ 431
A+ PAP P+ R SAT FP RL R P T P+
Sbjct: 351 AVNRQQPAPPPVARLPNSAT---FPTEKSRLPRAPPPAVTTPVPR 392
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 378 SPRLVRGAPEPQRTTTPQDLSAEHRAPPXPSNRRPLXGAGWGLSARTTRSAFTA 539
+P G P P R T + APP P+ ++P+ SA T +F +
Sbjct: 209 TPMSPSGMPPPPRYTAYAPPMSSQTAPPIPTKQQPVDSESSTTSASTRSGSFVS 262
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 322 PPQCYVGRDLPPGTSSPSHLHDS*GAHQS--HSAPPPHRTLVPSTGRPRHPAIDGP 483
PP PPG PS L GA H + PPHR + RPR + P
Sbjct: 60 PPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRP 115
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 160 GDYAFXKARWAKFSSRQTRPA*RLPTKPQRAPPLRLSGDPG 282
GDYA K +W+ FS +Q+ TK Q+A P G+PG
Sbjct: 601 GDYAIIKGKWSGFSRKQS------ATKGQKAKP----GNPG 631
>Z99942-1|CAB17068.2| 454|Caenorhabditis elegans Hypothetical
protein H13N06.2 protein.
Length = 454
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 349 LPPGTSSPSHLHDS*GAHQSHSAPPPHRTLVPSTGRP 459
+PPGTS+PS + H PP ++ S+G P
Sbjct: 83 MPPGTSTPSLSSAENSGNGPHPPAPPPQSSAESSGLP 119
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 686 PKSTRRDDDSDGRPASVGHKEDPGLYEEPGMP 591
P TR GRP G PGL PG P
Sbjct: 148 PPGTRGPQGEVGRPGQTGESGHPGLPGRPGKP 179
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 686 PKSTRRDDDSDGRPASVGHKEDPGLYEEPGMP 591
P TR GRP G PGL PG P
Sbjct: 148 PPGTRGPQGEVGRPGQTGESGHPGLPGRPGKP 179
>AF026210-5|AAB71287.1| 632|Caenorhabditis elegans Hypothetical
protein F48A11.5a protein.
Length = 632
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 121 TSSSFFHRRRGVRHNPVRPPS 59
+SS+ F RRG R NPV PP+
Sbjct: 162 SSSASFSSRRGTRANPVPPPN 182
>AF026210-4|AAT81192.1| 627|Caenorhabditis elegans Hypothetical
protein F48A11.5b protein.
Length = 627
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 121 TSSSFFHRRRGVRHNPVRPPS 59
+SS+ F RRG R NPV PP+
Sbjct: 157 SSSASFSSRRGTRANPVPPPN 177
>Z81586-4|CAB04688.2| 366|Caenorhabditis elegans Hypothetical
protein T05F1.5 protein.
Length = 366
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 253 PPLRLSGDPGTAMCAP*ARLRRLPPQCYVGRDLPPGTSSPSHLHDS*GAHQSHSAPPP 426
PP+++SG P + + P P TSS + H+ G +Q H +P P
Sbjct: 40 PPIQISGKPASTAKPTSGSPQHHPQPIEQATTNPSVTSSLINQHNRVGNNQGHRSPSP 97
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +3
Query: 306 PPSPAPTPMLRWAGSATGDFFPLSSPRL-VRGAPEPQR--TTTPQDLSAEHRAPPXPSNR 476
PP P P R GS+ P PR +P P+R T P R PP P R
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 477 RP 482
P
Sbjct: 182 NP 183
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +2
Query: 275 TQVPPCARHRPAFAGSHPNVTLGGICHRGLLPPLISTTREGRTRATA-----HHHPTGP* 439
T +P ++ A P+ + G+ R + I T R R+T+ HHHP
Sbjct: 1337 THLPGTSKISQQEASQEPSTSSQGMVRRSVNE--IETNRPSSLRSTSNSHHHHHHPAST- 1393
Query: 440 CRAPGAPXTQQSTAPXR-SRVGAFCP 514
AP T ST P SR+ + P
Sbjct: 1394 SSVASAPATLPSTTPSNLSRMASSSP 1419
>Z81539-2|CAB04390.1| 221|Caenorhabditis elegans Hypothetical
protein F46A8.4 protein.
Length = 221
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -3
Query: 121 TSSSFFHRRRGVRHNPVRPPSAGYP*RVGFPIDTKKKK 8
+S + RR G RH P RPP P R P+ T K +
Sbjct: 37 SSEDYSGRRGGGRHRPPRPPR---PPRPSRPVSTPKPR 71
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +2
Query: 275 TQVPPCARHRPAFAGSHPNVTLGGICHRGLLPPLISTTREGRTRATA-----HHHPTGP* 439
T +P ++ A P+ + G+ R + I T R R+T+ HHHP
Sbjct: 1337 THLPGTSKISQQEASQEPSTSSQGMVRRSVNE--IETNRPSSLRSTSNSHHHHHHPAST- 1393
Query: 440 CRAPGAPXTQQSTAPXR-SRVGAFCP 514
AP T ST P SR+ + P
Sbjct: 1394 SSVASAPATLPSTTPSNLSRMASSSP 1419
>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
protein Y43F8C.12 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 395 PHES-WR*EGEE-VPGGRSRPT*HWGGSRRRRAYGAHMAVPGSPLSRSGGARWGLVGSR* 222
P+E+ WR EG E PG SR + G R G + + + G + G+VG
Sbjct: 854 PNEAPWRIEGREPAPGWPSRGVVKFDGYSTRYREGLDLVLHDISADVAAGEKIGIVGRTG 913
Query: 221 AGR 213
AG+
Sbjct: 914 AGK 916
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.9 bits (59), Expect = 8.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 689 CXNGCGRGCSDVLSP 733
C +GCG GC D+ +P
Sbjct: 769 CFDGCGAGCRDIATP 783
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/70 (27%), Positives = 25/70 (35%)
Frame = -2
Query: 659 SDGRPASVGHKEDPGLYEEPGMPMNXXXXXXXXXXXXRFVGSEXXXXXXGRKPPPGSXQG 480
SDG+P + G K G PG P + G+ G + PPG+
Sbjct: 181 SDGQPGAAGDKGPAGPNGNPGAPGSPGKPGEDGKSEPITPGAPGPAGPPGPQGPPGAPGQ 240
Query: 479 PSIAGXRGRP 450
P G G P
Sbjct: 241 PGHDGQPGTP 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,270,214
Number of Sequences: 27780
Number of extensions: 402319
Number of successful extensions: 1702
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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