Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_O01
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0094 + 14378953-14380728 177 6e-45
07_03_1408 - 26353389-26355191 175 2e-44
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 31 0.98
12_01_0400 + 3169597-3170504,3170510-3171269 29 3.0
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 29 3.0
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 6.9
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 28 9.2
>03_03_0094 + 14378953-14380728
Length = 591
Score = 177 bits (432), Expect = 6e-45
Identities = 83/163 (50%), Positives = 116/163 (71%), Gaps = 2/163 (1%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K + +KDSAVNA+ YGAK+++PG+LR+E+ IEV +E+V++T KGEA+A+ +A MTT+ MA
Sbjct: 315 KRLVVKDSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMA 374
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
+CDHG AK+KRV+M+RDTYPRKWGLGP A +KK ++ +G LDK+GKPNE TP EWL +
Sbjct: 375 TCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHGKPNEKTPSEWLRNA 434
Query: 260 VNYNVKKEPENGDGVEEG--SRKRTASTANAEDPDVSIEVKQE 138
V P GD + G + E+ DV+ E K++
Sbjct: 435 V------LPAGGDAMIAGIAAAPEPEKPKVKEEADVAEETKEK 471
>07_03_1408 - 26353389-26355191
Length = 600
Score = 175 bits (427), Expect = 2e-44
Identities = 86/194 (44%), Positives = 123/194 (63%), Gaps = 1/194 (0%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K + +KDSAVNA+ YGAK+++PG+LR+E+ I+V +E+V++T KGEA+A+ +A MTT+ MA
Sbjct: 311 KRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMTTAVMA 370
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
+CDHG AK+KRV+M+RDTYPRKWGLGP A +KK ++ +G LDK+GKPNE TP EW+
Sbjct: 371 TCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMVAEGLLDKHGKPNEKTPAEWIR-- 428
Query: 260 VNYNVKKEPENGDG-VEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADA 84
NV P GD + + + AE V+ E +E +D E A+
Sbjct: 429 ---NVAL-PTGGDAMIASIAAAPEEAKVKAEQDVVATEEVKEKKKKKKHKDEEDAADEGR 484
Query: 83 TMDTSESPETAEQP 42
+ +A P
Sbjct: 485 KRKIEDDDASASVP 498
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 31.1 bits (67), Expect = 0.98
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -3
Query: 242 KEPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTS-E 66
K PE+ E+ S K A T EDP V++E + E + S P + +A ++ E
Sbjct: 1164 KLPEDSTTFEKPSEKDDAGTKQTEDP-VTLEKEPE-----EDKGSVEPTQDNAGLEKPLE 1217
Query: 65 SPETAEQPADDSV 27
E + +P++DSV
Sbjct: 1218 EDEASAKPSEDSV 1230
>12_01_0400 + 3169597-3170504,3170510-3171269
Length = 555
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 346 CEAFGPRPHFLGYVSRSIMTRLSFAATP 429
CEA P H Y +R + R+S AATP
Sbjct: 212 CEATSPVDHLAYYFARGLKLRISGAATP 239
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 197 RTASTANAEDPDVSIEVKQEXXXXXXKRDSEA-PAEADATMD--TSESPETAEQPADDSV 27
RTASTA A P + IE +Q KR EA P E D ++ +S + + +SV
Sbjct: 112 RTASTATAGQPKLDIEDEQSEDQKQNKRKKEASPEECDQAVEGLSSAKAKAKAKQVQESV 171
Query: 26 R 24
+
Sbjct: 172 K 172
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.3 bits (60), Expect = 6.9
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = -3
Query: 338 ILIQQGKLDKYGKPN-----ENTPKEWLNSYVNYNVKKEPENGDGVE-EGSRKRTASTAN 177
+ + +GK K GK N E V V E V+ + K+ S+++
Sbjct: 17 VSVSEGKSGKKGKRNAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSS 76
Query: 176 AEDPDVSIE-VKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQPADDSV 27
ED S E VK + + + PA+ +++ D+S+ + ++PA V
Sbjct: 77 EEDSSESEEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPV 127
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 335 LIQQGKLDKYGK-PNENTPKEWLNSY--VNYNVKKEPENGDGVEEGSRKRTASTANAEDP 165
L++ D G+ P + +E L Y V++ +EP+N D VEEG+ + +E+P
Sbjct: 4 LVENFDADDLGEMPQNHYNEEQLIPYSDVSHPYNEEPDNMDNVEEGNPYIQQVSLYSEEP 63
Query: 164 D 162
+
Sbjct: 64 E 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,925
Number of Sequences: 37544
Number of extensions: 288142
Number of successful extensions: 851
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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