BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_O01
(754 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ857345-1|ABI17547.1| 508|Drosophila melanogaster MFL protein ... 228 7e-60
AF097634-1|AAD19897.1| 508|Drosophila melanogaster minifly prot... 228 7e-60
AF089837-1|AAD16092.1| 508|Drosophila melanogaster minifly prot... 228 7e-60
AF017230-1|AAC97117.1| 508|Drosophila melanogaster nucleolar pr... 228 7e-60
AE013599-3835|AAX52682.1| 508|Drosophila melanogaster CG3333-PB... 228 7e-60
AE013599-3834|AAF47178.1| 508|Drosophila melanogaster CG3333-PA... 228 7e-60
AY089408-1|AAL90146.1| 468|Drosophila melanogaster AT23018p pro... 226 3e-59
AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE... 30 2.9
AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB... 30 2.9
AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD... 30 2.9
AE014296-1054|AAF50709.1| 438|Drosophila melanogaster CG6592-PA... 30 2.9
BT023374-1|AAY55790.1| 358|Drosophila melanogaster IP10363p pro... 30 3.9
BT023330-1|AAY55746.1| 191|Drosophila melanogaster IP10163p pro... 30 3.9
BT023274-1|AAY55690.1| 205|Drosophila melanogaster IP10063p pro... 30 3.9
AE014296-330|AAF47546.1| 305|Drosophila melanogaster CG7980-PA ... 30 3.9
BT012331-1|AAS77456.1| 336|Drosophila melanogaster AT18870p pro... 29 5.2
AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p pro... 29 5.2
AY058307-1|AAL13536.1| 355|Drosophila melanogaster GH07076p pro... 29 5.2
AE014296-1948|AAN11887.1| 336|Drosophila melanogaster CG7557-PB... 29 5.2
AE014296-1947|AAF50066.2| 355|Drosophila melanogaster CG7557-PA... 29 5.2
AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-P... 29 5.2
BT001634-1|AAN71389.1| 451|Drosophila melanogaster RE38701p pro... 29 9.0
AY058715-1|AAL13944.1| 451|Drosophila melanogaster LD45348p pro... 29 9.0
AE014297-327|AAF51973.2| 648|Drosophila melanogaster CG2179-PB,... 29 9.0
AE014297-326|AAF51972.2| 783|Drosophila melanogaster CG2179-PA,... 29 9.0
>DQ857345-1|ABI17547.1| 508|Drosophila melanogaster MFL protein
protein.
Length = 508
Score = 228 bits (557), Expect = 7e-60
Identities = 116/204 (56%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K I +KDS+VNAV YGAK+ LPG+LRYEDGIE+DQEIVI T KGEA+ LA+ALMTT+TMA
Sbjct: 295 KRIIMKDSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMA 354
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
SCDHGV AK+KRVIMERDTYPRKWGLGPKAS KK LI GKLDK+G+PNENTPKEWL Y
Sbjct: 355 SCDHGVVAKIKRVIMERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGY 414
Query: 260 VNYNVKK------EPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKR---DS 108
V+YN KK P NG + T+S VS E + K+ D
Sbjct: 415 VDYNAKKPAAQEVSPTNGSSEPSKRKLSTSSVEETAAAAVSEETPSKDKKKKKKKHKGDE 474
Query: 107 EAPAEADATMDTSESPETAEQPAD 36
EAP A+ + E + ++ D
Sbjct: 475 EAPEAAEEEAEPVEKEKKKKKKKD 498
>AF097634-1|AAD19897.1| 508|Drosophila melanogaster minifly protein
protein.
Length = 508
Score = 228 bits (557), Expect = 7e-60
Identities = 116/204 (56%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K I +KDS+VNAV YGAK+ LPG+LRYEDGIE+DQEIVI T KGEA+ LA+ALMTT+TMA
Sbjct: 295 KRIIMKDSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMA 354
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
SCDHGV AK+KRVIMERDTYPRKWGLGPKAS KK LI GKLDK+G+PNENTPKEWL Y
Sbjct: 355 SCDHGVVAKIKRVIMERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGY 414
Query: 260 VNYNVKK------EPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKR---DS 108
V+YN KK P NG + T+S VS E + K+ D
Sbjct: 415 VDYNAKKPAAQEVSPTNGSSEPSKRKLSTSSVEETAAAAVSEETPSKDKKKKKKKHKGDE 474
Query: 107 EAPAEADATMDTSESPETAEQPAD 36
EAP A+ + E + ++ D
Sbjct: 475 EAPEAAEEEAEPVEKEKKKKKKKD 498
>AF089837-1|AAD16092.1| 508|Drosophila melanogaster minifly protein
protein.
Length = 508
Score = 228 bits (557), Expect = 7e-60
Identities = 116/204 (56%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K I +KDS+VNAV YGAK+ LPG+LRYEDGIE+DQEIVI T KGEA+ LA+ALMTT+TMA
Sbjct: 295 KRIIMKDSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMA 354
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
SCDHGV AK+KRVIMERDTYPRKWGLGPKAS KK LI GKLDK+G+PNENTPKEWL Y
Sbjct: 355 SCDHGVVAKIKRVIMERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGY 414
Query: 260 VNYNVKK------EPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKR---DS 108
V+YN KK P NG + T+S VS E + K+ D
Sbjct: 415 VDYNAKKPAAQEVSPTNGSSEPSKRKLSTSSVEETAAAAVSEETPSKDKKKKKKKHKGDE 474
Query: 107 EAPAEADATMDTSESPETAEQPAD 36
EAP A+ + E + ++ D
Sbjct: 475 EAPEAAEEEAEPVEKEKKKKKKKD 498
>AF017230-1|AAC97117.1| 508|Drosophila melanogaster nucleolar
protein at band 60B protein.
Length = 508
Score = 228 bits (557), Expect = 7e-60
Identities = 116/204 (56%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K I +KDS+VNAV YGAK+ LPG+LRYEDGIE+DQEIVI T KGEA+ LA+ALMTT+TMA
Sbjct: 295 KRIIMKDSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMA 354
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
SCDHGV AK+KRVIMERDTYPRKWGLGPKAS KK LI GKLDK+G+PNENTPKEWL Y
Sbjct: 355 SCDHGVVAKIKRVIMERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGY 414
Query: 260 VNYNVKK------EPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKR---DS 108
V+YN KK P NG + T+S VS E + K+ D
Sbjct: 415 VDYNAKKPAAQEVSPTNGSSEPSKRKLSTSSVEETAAAAVSEETPSKDKKKKKKKHKGDE 474
Query: 107 EAPAEADATMDTSESPETAEQPAD 36
EAP A+ + E + ++ D
Sbjct: 475 EAPEAAEEEAEPVEKEKKKKKKKD 498
>AE013599-3835|AAX52682.1| 508|Drosophila melanogaster CG3333-PB,
isoform B protein.
Length = 508
Score = 228 bits (557), Expect = 7e-60
Identities = 116/204 (56%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K I +KDS+VNAV YGAK+ LPG+LRYEDGIE+DQEIVI T KGEA+ LA+ALMTT+TMA
Sbjct: 295 KRIIMKDSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMA 354
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
SCDHGV AK+KRVIMERDTYPRKWGLGPKAS KK LI GKLDK+G+PNENTPKEWL Y
Sbjct: 355 SCDHGVVAKIKRVIMERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGY 414
Query: 260 VNYNVKK------EPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKR---DS 108
V+YN KK P NG + T+S VS E + K+ D
Sbjct: 415 VDYNAKKPAAQEVSPTNGSSEPSKRKLSTSSVEETAAAAVSEETPSKDKKKKKKKHKGDE 474
Query: 107 EAPAEADATMDTSESPETAEQPAD 36
EAP A+ + E + ++ D
Sbjct: 475 EAPEAAEEEAEPVEKEKKKKKKKD 498
>AE013599-3834|AAF47178.1| 508|Drosophila melanogaster CG3333-PA,
isoform A protein.
Length = 508
Score = 228 bits (557), Expect = 7e-60
Identities = 116/204 (56%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K I +KDS+VNAV YGAK+ LPG+LRYEDGIE+DQEIVI T KGEA+ LA+ALMTT+TMA
Sbjct: 295 KRIIMKDSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMA 354
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
SCDHGV AK+KRVIMERDTYPRKWGLGPKAS KK LI GKLDK+G+PNENTPKEWL Y
Sbjct: 355 SCDHGVVAKIKRVIMERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGY 414
Query: 260 VNYNVKK------EPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKR---DS 108
V+YN KK P NG + T+S VS E + K+ D
Sbjct: 415 VDYNAKKPAAQEVSPTNGSSEPSKRKLSTSSVEETAAAAVSEETPSKDKKKKKKKHKGDE 474
Query: 107 EAPAEADATMDTSESPETAEQPAD 36
EAP A+ + E + ++ D
Sbjct: 475 EAPEAAEEEAEPVEKEKKKKKKKD 498
>AY089408-1|AAL90146.1| 468|Drosophila melanogaster AT23018p
protein.
Length = 468
Score = 226 bits (552), Expect = 3e-59
Identities = 107/154 (69%), Positives = 122/154 (79%), Gaps = 3/154 (1%)
Frame = -3
Query: 620 KXIXIKDSAVNAVXYGAKVLLPGILRYEDGIEVDQEIVIVTXKGEAVALAVALMTTSTMA 441
K I +KDS+VNAV YGAK+ LPG+LRYEDGIE+DQEIVI T KGEA+ LA+ALMTT+TMA
Sbjct: 295 KRIIMKDSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMA 354
Query: 440 SCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNENTPKEWLNSY 261
SCDHGV AK+KRVIMERDTYPRKWGLGPKAS KK LI GKLDK+G+PNENTPKEWL Y
Sbjct: 355 SCDHGVVAKIKRVIMERDTYPRKWGLGPKASAKKALIAAGKLDKFGRPNENTPKEWLTGY 414
Query: 260 VNYNVKKEPENGDGVEEGS---RKRTASTANAED 168
V+YN KK GS KR ST++ E+
Sbjct: 415 VDYNAKKPAAQEVSPTNGSSEPSKRKLSTSSVEE 448
>AE014297-3585|AAS65209.1| 2832|Drosophila melanogaster CG5794-PE,
isoform E protein.
Length = 2832
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 233 ENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEA---PAEADATMDTSES 63
E EE ++ T+S+ D DV +EV+++ + D+E+ PA+ + D S+
Sbjct: 2403 EEKSEAEEPTKMETSSSEIKADVDVEVEVEEKDKEKPAQTDTESKETPAKEEIADDKSKQ 2462
Query: 62 PETAEQPADDSVR 24
E E+ + R
Sbjct: 2463 DEPEEKKIEKQSR 2475
>AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB,
isoform B protein.
Length = 3703
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 233 ENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEA---PAEADATMDTSES 63
E EE ++ T+S+ D DV +EV+++ + D+E+ PA+ + D S+
Sbjct: 2194 EEKSEAEEPTKMETSSSEIKADVDVEVEVEEKDKEKPAQTDTESKETPAKEEIADDKSKQ 2253
Query: 62 PETAEQPADDSVR 24
E E+ + R
Sbjct: 2254 DEPEEKKIEKQSR 2266
>AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD,
isoform D protein.
Length = 3912
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = -3
Query: 233 ENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEA---PAEADATMDTSES 63
E EE ++ T+S+ D DV +EV+++ + D+E+ PA+ + D S+
Sbjct: 2403 EEKSEAEEPTKMETSSSEIKADVDVEVEVEEKDKEKPAQTDTESKETPAKEEIADDKSKQ 2462
Query: 62 PETAEQPADDSVR 24
E E+ + R
Sbjct: 2463 DEPEEKKIEKQSR 2475
>AE014296-1054|AAF50709.1| 438|Drosophila melanogaster CG6592-PA
protein.
Length = 438
Score = 30.3 bits (65), Expect = 2.9
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Frame = -3
Query: 470 VALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKILIQQGKLDKYGKPNE 291
V + + ++ CD G A +V D + G+ + + + +YGKP +
Sbjct: 328 VGITSFGSIYGCDRGYPAAFTKVASYLDWISDETGVSAHQDTTEAIFFDQYVREYGKPRQ 387
Query: 290 N---TPKEWLNSYV--NYNVKKEPENGDGVEEGSRKRTASTANAE 171
+ +E L V +V P + + + E R RT S ++E
Sbjct: 388 SRRLETEEQLEDDVPDELDVHPRPASDEDISENVRPRTRSRPHSE 432
>BT023374-1|AAY55790.1| 358|Drosophila melanogaster IP10363p
protein.
Length = 358
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 314 DKYGKPNENTPKEWLNSYVNYNVKKEP 234
D K + + K+WLNS +NYN K P
Sbjct: 226 DMSKKDSLESAKKWLNSALNYNASKRP 252
>BT023330-1|AAY55746.1| 191|Drosophila melanogaster IP10163p
protein.
Length = 191
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 314 DKYGKPNENTPKEWLNSYVNYNVKKEP 234
D K + + K+WLNS +NYN K P
Sbjct: 143 DMSKKDSLESAKKWLNSALNYNASKRP 169
>BT023274-1|AAY55690.1| 205|Drosophila melanogaster IP10063p
protein.
Length = 205
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 314 DKYGKPNENTPKEWLNSYVNYNVKKEP 234
D K + + K+WLNS +NYN K P
Sbjct: 157 DMSKKDSLESAKKWLNSALNYNASKRP 183
>AE014296-330|AAF47546.1| 305|Drosophila melanogaster CG7980-PA
protein.
Length = 305
Score = 29.9 bits (64), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 314 DKYGKPNENTPKEWLNSYVNYNVKKEP 234
D K + + K+WLNS +NYN K P
Sbjct: 145 DMSKKDSLESAKKWLNSALNYNASKRP 171
>BT012331-1|AAS77456.1| 336|Drosophila melanogaster AT18870p
protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 470 VALMTTSTMASCDHGVAAKLKRVIMERDTYPR 375
V L+ + +CDHG+ R+I+ER+ P+
Sbjct: 210 VNLLIIDNLTTCDHGLVPIYNRLILEREGEPK 241
>AY119180-1|AAM51040.1| 1082|Drosophila melanogaster SD02215p protein.
Length = 1082
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -3
Query: 251 NVKKEPENGDGVEEGSRKRTAS-TANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMD 75
N E E+ D +E + S T+ +E P +++++KQE E+PA
Sbjct: 994 NTSHEQEDDDPDQERAPPSPMSATSESEQPQINVDIKQEPEGLNEDFAPESPATKSTVKA 1053
Query: 74 TSESPETAEQPADDS 30
+ P + A ++
Sbjct: 1054 DPDEPSPSNPLASEA 1068
>AY058307-1|AAL13536.1| 355|Drosophila melanogaster GH07076p
protein.
Length = 355
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 470 VALMTTSTMASCDHGVAAKLKRVIMERDTYPR 375
V L+ + +CDHG+ R+I+ER+ P+
Sbjct: 229 VNLLIIDNLTTCDHGLVPIYNRLILEREGEPK 260
>AE014296-1948|AAN11887.1| 336|Drosophila melanogaster CG7557-PB,
isoform B protein.
Length = 336
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 470 VALMTTSTMASCDHGVAAKLKRVIMERDTYPR 375
V L+ + +CDHG+ R+I+ER+ P+
Sbjct: 210 VNLLIIDNLTTCDHGLVPIYNRLILEREGEPK 241
>AE014296-1947|AAF50066.2| 355|Drosophila melanogaster CG7557-PA,
isoform A protein.
Length = 355
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 470 VALMTTSTMASCDHGVAAKLKRVIMERDTYPR 375
V L+ + +CDHG+ R+I+ER+ P+
Sbjct: 229 VNLLIIDNLTTCDHGLVPIYNRLILEREGEPK 260
>AE014134-2794|AAF53577.3| 1082|Drosophila melanogaster CG31739-PA
protein.
Length = 1082
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -3
Query: 251 NVKKEPENGDGVEEGSRKRTAS-TANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMD 75
N E E+ D +E + S T+ +E P +++++KQE E+PA
Sbjct: 994 NTSHEQEDDDPDQERAPPSPMSATSESEQPQINVDIKQEPEGLNEDFAPESPATKSTVKA 1053
Query: 74 TSESPETAEQPADDS 30
+ P + A ++
Sbjct: 1054 DPDEPSPSNPLASEA 1068
>BT001634-1|AAN71389.1| 451|Drosophila melanogaster RE38701p
protein.
Length = 451
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -1
Query: 364 SDRKPHRKKSSYNKGNLTNMANQMRTHQKNG*TVTSTIMLRKNRRMVTVSRKAAES 197
S R R +S Y K + ++ + R+H ++ + + T RKNR++ + R + S
Sbjct: 280 SRRSKSRSRSHYRKSSYSSRSR--RSHSRSSRSRSKTPSQRKNRKLASTRRSRSSS 333
>AY058715-1|AAL13944.1| 451|Drosophila melanogaster LD45348p
protein.
Length = 451
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -1
Query: 364 SDRKPHRKKSSYNKGNLTNMANQMRTHQKNG*TVTSTIMLRKNRRMVTVSRKAAES 197
S R R +S Y K + ++ + R+H ++ + + T RKNR++ + R + S
Sbjct: 280 SRRSKSRSRSHYRKSSYSSRSR--RSHSRSSRSRSKTPSQRKNRKLASTRRSRSSS 333
>AE014297-327|AAF51973.2| 648|Drosophila melanogaster CG2179-PB,
isoform B protein.
Length = 648
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -1
Query: 364 SDRKPHRKKSSYNKGNLTNMANQMRTHQKNG*TVTSTIMLRKNRRMVTVSRKAAES 197
S R R +S Y K + ++ + R+H ++ + + T RKNR++ + R + S
Sbjct: 477 SRRSKSRSRSHYRKSSYSSRSR--RSHSRSSRSRSKTPSQRKNRKLASTRRSRSSS 530
>AE014297-326|AAF51972.2| 783|Drosophila melanogaster CG2179-PA,
isoform A protein.
Length = 783
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -1
Query: 364 SDRKPHRKKSSYNKGNLTNMANQMRTHQKNG*TVTSTIMLRKNRRMVTVSRKAAES 197
S R R +S Y K + ++ + R+H ++ + + T RKNR++ + R + S
Sbjct: 612 SRRSKSRSRSHYRKSSYSSRSR--RSHSRSSRSRSKTPSQRKNRKLASTRRSRSSS 665
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,140,368
Number of Sequences: 53049
Number of extensions: 494752
Number of successful extensions: 1855
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1853
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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