Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_N24
(791 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 224 9e-59
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 224 9e-59
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 224 9e-59
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 224 9e-59
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 217 1e-56
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 224 bits (548), Expect = 9e-59
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = -1
Query: 443 YRIGQGIHKKDGKVIKNNASTECDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 264
YRIG GIH KDGKVIKNNASTE DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRI
Sbjct: 285 YRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRI 344
Query: 263 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAAT 84
ITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT
Sbjct: 345 ITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAAT 404
Query: 83 TTPA 72
T A
Sbjct: 405 TAAA 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = -2
Query: 778 RXKRXSHYGIQXXRGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 599
R K+ IQ G+IEDKVKW REHLEKPI V +VF QDEMIDC+ TS
Sbjct: 174 RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTS 233
Query: 598 RWHTKKLPRKTXQG 557
RWHTKKLPRKT +G
Sbjct: 234 RWHTKKLPRKTHKG 247
Score = 75.8 bits (178), Expect = 6e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 585 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMXQE 448
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+ ++
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 283
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 224 bits (548), Expect = 9e-59
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = -1
Query: 443 YRIGQGIHKKDGKVIKNNASTECDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 264
YRIG GIH KDGKVIKNNASTE DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRI
Sbjct: 272 YRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRI 331
Query: 263 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAAT 84
ITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT
Sbjct: 332 ITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAAT 391
Query: 83 TTPA 72
T A
Sbjct: 392 TAAA 395
Score = 91.5 bits (217), Expect = 1e-18
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = -2
Query: 778 RXKRXSHYGIQXXRGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 599
R K+ IQ G+IEDKVKW REHLEKPI V +VF QDEMIDC+ TS
Sbjct: 161 RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTS 220
Query: 598 RWHTKKLPRKTXQG 557
RWHTKKLPRKT +G
Sbjct: 221 RWHTKKLPRKTHKG 234
Score = 75.8 bits (178), Expect = 6e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 585 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMXQE 448
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+ ++
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 270
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 224 bits (548), Expect = 9e-59
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = -1
Query: 443 YRIGQGIHKKDGKVIKNNASTECDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 264
YRIG GIH KDGKVIKNNASTE DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRI
Sbjct: 272 YRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRI 331
Query: 263 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAAT 84
ITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT
Sbjct: 332 ITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAAT 391
Query: 83 TTPA 72
T A
Sbjct: 392 TAAA 395
Score = 91.5 bits (217), Expect = 1e-18
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = -2
Query: 778 RXKRXSHYGIQXXRGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 599
R K+ IQ G+IEDKVKW REHLEKPI V +VF QDEMIDC+ TS
Sbjct: 161 RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTS 220
Query: 598 RWHTKKLPRKTXQG 557
RWHTKKLPRKT +G
Sbjct: 221 RWHTKKLPRKTHKG 234
Score = 75.8 bits (178), Expect = 6e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 585 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMXQE 448
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+ ++
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 270
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 224 bits (548), Expect = 9e-59
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = -1
Query: 443 YRIGQGIHKKDGKVIKNNASTECDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 264
YRIG GIH KDGKVIKNNASTE DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRI
Sbjct: 285 YRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRI 344
Query: 263 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAAAT 84
ITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAAAT
Sbjct: 345 ITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAAAT 404
Query: 83 TTPA 72
T A
Sbjct: 405 TAAA 408
Score = 91.5 bits (217), Expect = 1e-18
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = -2
Query: 778 RXKRXSHYGIQXXRGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 599
R K+ IQ G+IEDKVKW REHLEKPI V +VF QDEMIDC+ TS
Sbjct: 174 RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTS 233
Query: 598 RWHTKKLPRKTXQG 557
RWHTKKLPRKT +G
Sbjct: 234 RWHTKKLPRKTHKG 247
Score = 75.8 bits (178), Expect = 6e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 585 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMXQE 448
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+ ++
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 283
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 217 bits (531), Expect = 1e-56
Identities = 101/118 (85%), Positives = 108/118 (91%)
Frame = -1
Query: 443 YRIGQGIHKKDGKVIKNNASTECDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRI 264
YRIG GIH KDGKVIKNNASTE DL++KSITPMGGFPHYGEVNNDFVMIKGCC+G KKRI
Sbjct: 296 YRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRI 355
Query: 263 ITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 90
ITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LKKDR++EEAA
Sbjct: 356 ITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEEAA 413
Score = 91.5 bits (217), Expect = 1e-18
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = -2
Query: 778 RXKRXSHYGIQXXRGTIEDKVKWXREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 599
R K+ IQ G+IEDKVKW REHLEKPI V +VF QDEMIDC+ TS
Sbjct: 185 RQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTS 244
Query: 598 RWHTKKLPRKTXQG 557
RWHTKKLPRKT +G
Sbjct: 245 RWHTKKLPRKTHKG 258
Score = 75.8 bits (178), Expect = 6e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -3
Query: 585 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMXQE 448
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+ ++
Sbjct: 249 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKK 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,685,769
Number of Sequences: 53049
Number of extensions: 761040
Number of successful extensions: 1930
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1930
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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