Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_N22
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 60 7e-09
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 60 7e-09
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 60 7e-09
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 58 5e-08
AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens ... 32 2.8
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 31 4.9
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 31 4.9
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 31 4.9
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 31 4.9
AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive dom... 31 4.9
AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens ... 31 4.9
AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens ... 31 4.9
AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 31 4.9
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 31 4.9
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 31 4.9
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 31 4.9
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 31 4.9
BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein ... 31 6.4
BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein LO... 31 6.4
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 31 6.4
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 30 8.5
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 60.5 bits (140), Expect = 7e-09
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Frame = -3
Query: 501 DQLETKSILTALESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPP 325
D + K + ALE+S GA + KK + + P G G KLP
Sbjct: 510 DSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPK 564
Query: 324 NADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSK----QQT 163
N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK T
Sbjct: 565 NYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSSPPT 624
Query: 162 TPSPGDLCQESPGRSQ--ADRERLAAQATAEEERQ 64
+P PG S S R + A A A +++Q
Sbjct: 625 SPRPGSAATVSASTSNIIPPRHQKPAGAPATKKKQ 659
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 60.5 bits (140), Expect = 7e-09
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Frame = -3
Query: 501 DQLETKSILTALESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPP 325
D + K + ALE+S GA + KK + + P G G KLP
Sbjct: 510 DSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPK 564
Query: 324 NADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSK----QQT 163
N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK T
Sbjct: 565 NYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSSPPT 624
Query: 162 TPSPGDLCQESPGRSQ--ADRERLAAQATAEEERQ 64
+P PG S S R + A A A +++Q
Sbjct: 625 SPRPGSAATVSASTSNIIPPRHQKPAGAPATKKKQ 659
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 60.5 bits (140), Expect = 7e-09
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Frame = -3
Query: 501 DQLETKSILTALESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPP 325
D + K + ALE+S GA + KK + + P G G KLP
Sbjct: 510 DSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPK 564
Query: 324 NADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSK----QQT 163
N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK T
Sbjct: 565 NYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSEVDASKTVSSPPT 624
Query: 162 TPSPGDLCQESPGRSQ--ADRERLAAQATAEEERQ 64
+P PG S S R + A A A +++Q
Sbjct: 625 SPRPGSAATVSASTSNIIPPRHQKPAGAPATKKKQ 659
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 57.6 bits (133), Expect = 5e-08
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = -3
Query: 501 DQLETKSILTALESSKWMMGAKVV-KKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPP 325
D + K + ALE+S GA + KK + + P G G KLP
Sbjct: 455 DSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQGQ--GDLKKKKKKKKGKLPK 509
Query: 324 NADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSKQQTTP 157
N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK ++P
Sbjct: 510 NYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSSP 567
>AK023016-1|BAB14359.1| 692|Homo sapiens protein ( Homo sapiens
cDNA FLJ12954 fis, clone NT2RP2005491, weakly similar to
PARAMYOSIN. ).
Length = 692
Score = 31.9 bits (69), Expect = 2.8
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = -1
Query: 377 SWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSSRVAKECPPL 198
+W + ++ ++ N R+T+TS N +S + + E L+ S R + PP
Sbjct: 554 NWGTQTEKEDTSNINPRQTETSVN------ASRSPEKCAQQRQERLNSASQR-SSSLPPS 606
Query: 197 PRINMT*VNSRPRLAPATSAKSPRVEVKQTES 102
R + T L P T A SP+ K+ S
Sbjct: 607 NRKSSTPTKREIMLTPVTVAYSPKRSPKENLS 638
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1889
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1289
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1889
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1289
>AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive domain
1A (SWI- like) isoform a variant protein.
Length = 1181
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 741 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 785
>AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens
cDNA FLJ90459 fis, clone NT2RP3001754. ).
Length = 754
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 314 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 358
>AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ14749 fis, clone NT2RP3002876, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 613
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 173 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 217
>AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens
cDNA FLJ14536 fis, clone NT2RM2001105, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 527
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 87 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 131
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA1 protein.
Length = 1999
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1559 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1603
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1289
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein p270
protein.
Length = 1927
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1487 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1531
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1889
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling factor
p250 protein.
Length = 1939
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 296 RKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 162
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1499 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1543
>BC130440-1|AAI30441.1| 1031|Homo sapiens M-phase phosphoprotein 9
protein.
Length = 1031
Score = 30.7 bits (66), Expect = 6.4
Identities = 23/92 (25%), Positives = 38/92 (41%)
Frame = -1
Query: 377 SWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSSRVAKECPPL 198
+W + ++ ++ N R+T+TS N C + R S +S+ + PP
Sbjct: 758 NWGTQTEKEDTSNINPRQTETSVNASRSPEKCAQQRQKRLNS-------ASQRSSSLPPS 810
Query: 197 PRINMT*VNSRPRLAPATSAKSPRVEVKQTES 102
R + T L P T A SP+ K+ S
Sbjct: 811 NRKSSTPTKREIMLTPVTVAYSPKRSPKENLS 842
>BC044311-1|AAH44311.2| 399|Homo sapiens hypothetical protein
LOC339344 protein.
Length = 399
Score = 30.7 bits (66), Expect = 6.4
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Frame = -1
Query: 395 PELPALSWDRRRKRNASATANSRRTQTS------PNLPIRKGGCQSTSELRTESDEALD- 237
P+ LS DRR R A +A+S+ +S P+ ++GGC E + AL
Sbjct: 151 PQRYVLSEDRREDRRADTSAHSKAGSSSPEPWARPSCTPQEGGCPRPKERESPPPSALQP 210
Query: 236 VTSSRVAKECPP 201
V R+A PP
Sbjct: 211 VQLPRLALSPPP 222
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 312 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 211
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGLPPREGPSRRAEEPGSRG 2147
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator
suppressor-of-white-apricot mRNA, complete cds. ).
Length = 951
Score = 30.3 bits (65), Expect = 8.5
Identities = 23/88 (26%), Positives = 36/88 (40%)
Frame = -3
Query: 330 PPNADLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQGMSTTATDQYDMSKQQTTPSP 151
PP+ SK DP R K ++ K+R R S + + + +K + PS
Sbjct: 737 PPDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAK-HSLPSA 795
Query: 150 GDLCQESPGRSQADRERLAAQATAEEER 67
+ S RS++ R R + EER
Sbjct: 796 YRTVRRSRSRSRSPRRRAHSPERRREER 823
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,936,768
Number of Sequences: 237096
Number of extensions: 1673971
Number of successful extensions: 5708
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5698
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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