Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_N22
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 54 9e-08
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 30 2.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical p... 28 6.8
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 28 6.8
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 28 9.0
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 28 9.0
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 54.4 bits (125), Expect = 9e-08
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = -3
Query: 501 DQLETKSILTALESSKWMMGAKVVKKTVQSKQEQSPGTPGSELGQXXXXXXXXXXKLPPN 322
+ +E + LE S W++ + ++ ++K Q+ + + LP N
Sbjct: 550 ETMEVDVNVDELEDSDWILYGEKYRQKKEAKSPQTAEIAATRKLKIATKRKRKIR-LPKN 608
Query: 321 ADLSKPPDPERWLPKYERTAY-RKRRGIRRDVIKGSQGMSTTATDQYDMSKQQTTPSP 151
+ + PDPERWLP+ ER+ Y RKR+ R++ +G+QG S+ + ++ +P P
Sbjct: 609 YNSAVTPDPERWLPRQERSTYKRKRKNREREIGRGTQGSSSANPNVEYVTASPNSPRP 666
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/110 (22%), Positives = 46/110 (41%)
Frame = -1
Query: 443 ELKSSRRLFKASRNNLPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSEL 264
E K S+++ K +N + S R+ K+N + S T P + G Q+ +EL
Sbjct: 211 ESKKSKKI-KKKKNKKSKDKKKSNSRKNKKNKKSKGKSTSTSEPPTPNQPETGVQTANEL 269
Query: 263 RTESDEALDVTSSRVAKECPPLPRINMT*VNSRPRLAPATSAKSPRVEVK 114
R ++ E+ T+ + P ++ + P + K+ EVK
Sbjct: 270 RNDAPESNVNTAMSIQSPVQDTPEPDVKTASEAKNDIPESGVKT-AAEVK 318
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -1
Query: 392 ELPALSWDRRRKRNASATANSRRT---QTSPNLPIRKGGCQSTSELRTESDEALDVTSSR 222
E A +W RRR+ +R+T + + +P +K S R+ + SSR
Sbjct: 247 EAEAPNWRRRRRAKEDQNVKARKTKKVKKNEEVPSKKSSKMSKRSKRSTDENLETAKSSR 306
Query: 221 VAKECPP 201
+ K+ P
Sbjct: 307 ILKDSEP 313
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = -1
Query: 437 KSSRRLFKASRNNLPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRT 258
KSSR+ K S+ + E + S D R + S T +S GG STSE +
Sbjct: 675 KSSRKRSKKSKKS-NETSSSSSDERLIHSQSPPTPQNTTSSSDVSSSSSGGSASTSESSS 733
Query: 257 ESDEALDVTSSRVAKE 210
+ A V++ + +K+
Sbjct: 734 SAPSAEQVSTPKKSKK 749
>Z81068-12|CAJ30227.1| 558|Caenorhabditis elegans Hypothetical
protein F25H5.3d protein.
Length = 558
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 180 MSKQQTTPSPGDLCQESPGRSQADRERLAAQATAEEERQG 61
M+ Q GD E S + R RLA + T EEE G
Sbjct: 1 MASSQELAEAGDTINEVKASSASGRGRLARRMTIEEEHAG 40
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/63 (26%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +3
Query: 582 RPAPFPRXQXXPXXXXXPXXPPTXXPXL--XGAXXPGPVXXXXXXSXPASNXLXXXSAXP 755
+P PFP+ P P P P L P P+ S P N + P
Sbjct: 119 KPKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMP 178
Query: 756 XPK 764
PK
Sbjct: 179 KPK 181
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 198 ATDQYDMSKQQTTPSPGDLCQESPGRSQADRERLAAQATAEE 73
A +Y + TP+P +E+P +QA E A AEE
Sbjct: 658 AAAEYAAPVAEETPAPAPAAEETPAPAQAAEETPAPAPAAEE 699
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 294 ERWLPKYERTAYRKRRGIRRDVIKG 220
E WLP YE+ A K +G D +G
Sbjct: 64 EEWLPMYEQLAKEKEQGTYADFYEG 88
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 294 ERWLPKYERTAYRKRRGIRRDVIKG 220
E WLP YE+ A K +G D +G
Sbjct: 64 EEWLPMYEQLAKEKEQGTYADFYEG 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,442,561
Number of Sequences: 27780
Number of extensions: 229589
Number of successful extensions: 930
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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