Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_N21
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         31   0.95 
02_05_0686 - 30900748-30902167,30903442-30904742                       30   2.2  
04_03_1022 - 21778315-21779007                                         29   3.8  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           28   8.9  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 16/52 (30%), Positives = 18/52 (34%)
 Frame = +2

Query: 560 PPXXXQXXPXXPPXXLXSRXPXXXXXLRAXXPXPPPXLXXLAXGXXPPXXPP 715
           PP      P  PP     R P     +    P PPP L   +    PP  PP
Sbjct: 148 PPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPP 199



 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/52 (32%), Positives = 20/52 (38%)
 Frame = +2

Query: 560 PPXXXQXXPXXPPXXLXSRXPXXXXXLRAXXPXPPPXLXXLAXGXXPPXXPP 715
           PP   Q  P  PP    +R P     +    P PPP L   +    PP  PP
Sbjct: 181 PPPSLQ--PPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPP 230


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 22/93 (23%), Positives = 24/93 (25%)
 Frame = +1

Query: 436 PXXXCPPFPXRLAPRXSXXXXPTXXXHPXXSGVGPXFRGXPSTPXXPKXPXXPSPXXXXP 615
           P    P  P  +A        P     P  +   P     P     P  P  P P     
Sbjct: 292 PGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAK 351

Query: 616 XXXXPLXPAGXXAXXPPXSGXSGXGXXXPXSPP 714
               P  P G     PP  G    G   P  PP
Sbjct: 352 GPPPPPPPKGPSPPPPPPPGGKKGG--PPPPPP 382



 Score = 28.3 bits (60), Expect = 8.9
 Identities = 21/86 (24%), Positives = 24/86 (27%)
 Frame = +1

Query: 454 PFPXRLAPRXSXXXXPTXXXHPXXSGVGPXFRGXPSTPXXPKXPXXPSPXXXXPXXXXPL 633
           P P    P       P     P  +   P  +G P  P     P  P P    P    P 
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP---PPP 367

Query: 634 XPAGXXAXXPPXSGXSGXGXXXPXSP 711
            P G     PP     G     P +P
Sbjct: 368 PPPGGKKGGPPPPPPKGGASRPPAAP 393


>04_03_1022 - 21778315-21779007
          Length = 230

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/47 (29%), Positives = 16/47 (34%)
 Frame = +2

Query: 584 PXXPPXXLXSRXPXXXXXLRAXXPXPPPXLXXLAXGXXPPXXPPLXW 724
           P  PP    +R P     L    P PPP    +     PP   P  W
Sbjct: 16  PPPPPPATRARPPCSSAHLLPPPPPPPPPPPYVPPHLLPPSPAPQQW 62


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 20/72 (27%), Positives = 21/72 (29%)
 Frame = +1

Query: 499 PTXXXHPXXSGVGPXFRGXPSTPXXPKXPXXPSPXXXXPXXXXPLXPAGXXAXXPPXSGX 678
           P     P  +G G      P  P  P  P  P P    P    P   AG     PP    
Sbjct: 334 PPPAPSPSAAGAG----SGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPAL 389

Query: 679 SGXGXXXPXSPP 714
            G G      PP
Sbjct: 390 PG-GPRARGPPP 400


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,026,093
Number of Sequences: 37544
Number of extensions: 239759
Number of successful extensions: 801
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)