Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_N19
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal prote...   233   8e-62
Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal prote...   233   8e-62
Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical p...   233   8e-62
Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical p...   233   8e-62
Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical p...   233   8e-62
Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical pr...   233   8e-62
Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical pr...   233   8e-62
Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical pr...   233   8e-62

>Z69337-1|CAA93269.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 27/70 (38%), Positives = 34/70 (48%)
 Frame = -2

Query: 764 HIXXIQXXXGTIXXKSEXXQRTXGRNXSLSILCLPQDEMXDCIXXXXXXXXXXXTSRWHT 585
           H+  IQ   GTI  K +  +    +   +  +   QDEM D I           TSRWHT
Sbjct: 179 HLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHT 237

Query: 584 KKLPRKTXQG 555
           KKLPRKT +G
Sbjct: 238 KKLPRKTHKG 247


>Z69336-1|CAA93268.1|  401|Caenorhabditis elegans ribosomal protein
           L3 protein.
          Length = 401

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 27/70 (38%), Positives = 34/70 (48%)
 Frame = -2

Query: 764 HIXXIQXXXGTIXXKSEXXQRTXGRNXSLSILCLPQDEMXDCIXXXXXXXXXXXTSRWHT 585
           H+  IQ   GTI  K +  +    +   +  +   QDEM D I           TSRWHT
Sbjct: 179 HLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHT 237

Query: 584 KKLPRKTXQG 555
           KKLPRKT +G
Sbjct: 238 KKLPRKTHKG 247


>Z66495-15|CAH04728.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 27/70 (38%), Positives = 34/70 (48%)
 Frame = -2

Query: 764 HIXXIQXXXGTIXXKSEXXQRTXGRNXSLSILCLPQDEMXDCIXXXXXXXXXXXTSRWHT 585
           H+  IQ   GTI  K +  +    +   +  +   QDEM D I           TSRWHT
Sbjct: 81  HLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHT 139

Query: 584 KKLPRKTXQG 555
           KKLPRKT +G
Sbjct: 140 KKLPRKTHKG 149


>Z66495-14|CAH04729.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -2

Query: 677 SILCLPQDEMXDCIXXXXXXXXXXXTSRWHTKKLPRKTXQG 555
           SI  +   +M D I           TSRWHTKKLPRKT +G
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199


>Z66495-12|CAA91277.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 27/70 (38%), Positives = 34/70 (48%)
 Frame = -2

Query: 764 HIXXIQXXXGTIXXKSEXXQRTXGRNXSLSILCLPQDEMXDCIXXXXXXXXXXXTSRWHT 585
           H+  IQ   GTI  K +  +    +   +  +   QDEM D I           TSRWHT
Sbjct: 179 HLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHT 237

Query: 584 KKLPRKTXQG 555
           KKLPRKT +G
Sbjct: 238 KKLPRKTHKG 247


>Z49936-8|CAH10798.1|  303|Caenorhabditis elegans Hypothetical
           protein F13B10.2d protein.
          Length = 303

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 200 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 256

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 27/70 (38%), Positives = 34/70 (48%)
 Frame = -2

Query: 764 HIXXIQXXXGTIXXKSEXXQRTXGRNXSLSILCLPQDEMXDCIXXXXXXXXXXXTSRWHT 585
           H+  IQ   GTI  K +  +    +   +  +   QDEM D I           TSRWHT
Sbjct: 81  HLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHT 139

Query: 584 KKLPRKTXQG 555
           KKLPRKT +G
Sbjct: 140 KKLPRKTHKG 149


>Z49936-7|CAH10799.1|  353|Caenorhabditis elegans Hypothetical
           protein F13B10.2c protein.
          Length = 353

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 250 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 306

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = -2

Query: 677 SILCLPQDEMXDCIXXXXXXXXXXXTSRWHTKKLPRKTXQG 555
           SI  +   +M D I           TSRWHTKKLPRKT +G
Sbjct: 159 SIRVIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199


>Z49936-6|CAA90183.1|  401|Caenorhabditis elegans Hypothetical
           protein F13B10.2a protein.
          Length = 401

 Score =  233 bits (571), Expect = 8e-62
 Identities = 109/162 (67%), Positives = 131/162 (80%)
 Frame = -3

Query: 583 RSYPVRHXKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGK 404
           +  P +  KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+    ++GK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297

Query: 403 VIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKR 224
              NN STE+DL++K+ITPMGGFP YG VN D++M++G  +GPKKR+ITLRKSL   TKR
Sbjct: 298 ---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKR 354

Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 98
            A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 27/70 (38%), Positives = 34/70 (48%)
 Frame = -2

Query: 764 HIXXIQXXXGTIXXKSEXXQRTXGRNXSLSILCLPQDEMXDCIXXXXXXXXXXXTSRWHT 585
           H+  IQ   GTI  K +  +    +   +  +   QDEM D I           TSRWHT
Sbjct: 179 HLVEIQVNGGTIEQKVDWAREHLEKQVQVDTV-FAQDEMIDTIGVTRGHGFKGVTSRWHT 237

Query: 584 KKLPRKTXQG 555
           KKLPRKT +G
Sbjct: 238 KKLPRKTHKG 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,879,411
Number of Sequences: 27780
Number of extensions: 360693
Number of successful extensions: 871
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)