Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_N16
         (788 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ...    51   2e-07
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ...    29   1.0  
SPCC613.03 |||conserved fungal protein|Schizosaccharomyces pombe...    28   1.3  
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch...    27   3.1  
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy...    27   3.1  
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ...    27   4.0  
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|...    26   7.1  
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|...    26   7.1  

>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 598

 Score = 51.2 bits (117), Expect = 2e-07
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = -2

Query: 337 FMEQYYGMDCEDVIAGDLPTRFKYRQVLPNDFGLSVEEILLADDKELTQWVPLKKIVKYR 158
           ++E+ YG+  E VI  +  ++F+Y+QV P  FGL + +IL A D +L  +V LKK+  YR
Sbjct: 514 YVEEKYGVP-EAVIVKN--SKFRYQQVAPETFGLDILDILNASDADLNNYVGLKKMTPYR 570

Query: 157 -PQHVEKGDLNTYAAKAADINLKKKI 83
            P+ + + D   Y  K      KK++
Sbjct: 571 TPEEIAR-DKKKYGKKKRLREWKKQV 595


>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 2493

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 334  MEQYYGMDCEDVIAGDLPTRFKYRQVLPNDF 242
            +EQ+ G   + V+A  LP+  ++ +VL NDF
Sbjct: 1580 IEQFDGQKKKCVLASSLPSEERFTEVLTNDF 1610


>SPCC613.03 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 189

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
 Frame = -2

Query: 601 ELEIEHWEDYEPEG----GESHPAPHDAPHCEDPDFNMDADYDPNEARTNLVE 455
           E E+ H E Y P G     E+   P D  H +  D     D  P E R + V+
Sbjct: 124 EFEMHHVEKYHPAGLDEPDENWNHPEDIEHFQKHDEIFHGDKKPEERRKHFVK 176


>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
           Spo14|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 395

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2

Query: 601 ELEIEHWEDYEPEGGESH 548
           +L++  +EDYEPE GE H
Sbjct: 37  KLKLLSYEDYEPEVGEGH 54


>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = -1

Query: 185 AAQEDSQVSTSTRGEGRPQYLRSESGRYQLEEENITESLQGFTRGARSNHTRAES 21
           AAQ+ S+V  +   E +P  L +   +  + EEN T   +G       N+T AES
Sbjct: 398 AAQQTSEVEANNHQE-KPSSLPAVE-QINVNEENNTPETEGLEDEKEENNTAAES 450


>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1877

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 122  VGIEVSLLHVLRSILDYLLERHPLRELFVVCQKNLL 229
            V  E+S++  LR  LD  L R+PL+    + QK L+
Sbjct: 1240 VAAEISVMRSLRDKLDSFLLRYPLKVSTTLKQKLLI 1275


>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1402

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = -2

Query: 292 GDLPTRFKYRQVLPND--FGLSVEEILLADDKELTQWVPLKKI--VKYRP 155
           G  P   +  Q LP    FGL + +  L D  E  +W P  KI   KY P
Sbjct: 48  GSDPQSLRGLQKLPRTLYFGLPLPDSELDDTGEAKRWFPRNKIRTAKYTP 97


>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 598

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 598 LEIEHWEDYEPEGGESHPAPHDAPHCEDPDFNMDADYDPNE 476
           + +EH E+ EPE   ++ +    P   + D + D    PNE
Sbjct: 242 ITVEHAENAEPETPRNNVSFSRKPSIAEQDSSQDITMPPNE 282


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,224,617
Number of Sequences: 5004
Number of extensions: 36830
Number of successful extensions: 169
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)