Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_N16
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 105 4e-23
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 2.9
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 2.9
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81111-1|CAB03265.1| 349|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 28 8.8
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 28 8.8
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 105 bits (252), Expect = 4e-23
Identities = 49/107 (45%), Positives = 67/107 (62%)
Frame = -2
Query: 400 LAELLSGERPTYVPGDLPYAHFMEQYYGMDCEDVIAGDLPTRFKYRQVLPNDFGLSVEEI 221
L + L+ ++P + P + + + +YY +D ED+I GD PTRFKYR V NDFGLS +EI
Sbjct: 491 LKDALARKKPLFNPKEKTFEEYFNEYYALDYEDII-GDTPTRFKYRDVESNDFGLSTDEI 549
Query: 220 LLADDKELTQWVPLKKIVKYRPQHVEKGDLNTYAAKAADINLKKKIL 80
L AD+++L W LKK+ YR E D Y KA D+N KK+IL
Sbjct: 550 LEADERQLNAWASLKKVTAYRTSQEEFFDRKAYQRKAEDVNKKKRIL 596
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +2
Query: 140 LLHVLRSILDYLLERHPL-RELFVVCQKNLLHRQPEVVG----QHLPVLEARGQ 286
L+ +L + +L + PL +++ +C KN+ +R+P VG HL V E G+
Sbjct: 163 LIEILPQVEFHLPQCDPLIKKVLEICFKNVQYREPSAVGINKTNHLVVAETYGE 216
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +2
Query: 140 LLHVLRSILDYLLERHPL-RELFVVCQKNLLHRQPEVVG----QHLPVLEARGQ 286
L+ +L + +L + PL +++ +C KN+ +R+P VG HL V E G+
Sbjct: 163 LIEILPQVEFHLPQCDPLIKKVLEICFKNVQYREPSAVGINKTNHLVVAETYGE 216
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 181 LKKIVKYRPQHVEKGDLNTYAAKAADINLKKKILPSLFKDLPEEPEVIIPEQKV 20
LKKI+K R + DL A AA L K +LP + + L E +PE+ V
Sbjct: 1161 LKKIMKCRLPKANEADLK--AGSAAISQLHKLVLPFVMRRLKTEVLKELPEKNV 1212
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical protein
F15D4.1 protein.
Length = 1529
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 181 LKKIVKYRPQHVEKGDLNTYAAKAADINLKKKILPSLFKDLPEEPEVIIPEQKV 20
LKKI+K R + DL A AA L K +LP + + L E +PE+ V
Sbjct: 1161 LKKIMKCRLPKANEADLK--AGSAAISQLHKLVLPFVMRRLKTEVLKELPEKNV 1212
>Z81111-1|CAB03265.1| 349|Caenorhabditis elegans Hypothetical
protein T01G5.1 protein.
Length = 349
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = -2
Query: 259 VLPNDFGLSVEEILLADDKELTQWVPLKKIVKYRPQHVEKGDLNTYAAKAADINLKKKIL 80
+L + +++ LAD + L + + L+ I R + + G+ A IN +K+
Sbjct: 157 LLSYGYQIAIAMKFLADSRCLHRALALRSIFVTRNKTIRIGEFGL-----ARINARKEYY 211
Query: 79 PSLFKDLPEEPEVIIPEQKVNKK 11
LP PEV+ PE +KK
Sbjct: 212 IMKSPQLPLAPEVMAPESSEDKK 234
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = -2
Query: 91 KKILPSLFKDLPEEPE 44
KK+LP++ +D+PE+PE
Sbjct: 3026 KKVLPTMKEDIPEDPE 3041
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = -2
Query: 91 KKILPSLFKDLPEEPE 44
KK+LP++ +D+PE+PE
Sbjct: 3035 KKVLPTMKEDIPEDPE 3050
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -2
Query: 229 EEILLADDKELTQWVPLKKIVKYRPQHVEKGDLNTYAAKAADINLKKKILPSLFK-DLPE 53
EEI ++D + V + + + +V + DL TY +A +I K L + + P
Sbjct: 290 EEIKMSDKFNIFVNVGVSQGAHLKIHNVNENDLGTYKCEANNIKAKSYHTIHLREANAPA 349
Query: 52 EPEVIIPEQK 23
EP+V + E K
Sbjct: 350 EPKVTLIEDK 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,740,370
Number of Sequences: 27780
Number of extensions: 220832
Number of successful extensions: 882
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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