Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_N12
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486...    30   2.3  
07_03_1107 - 24024387-24024497,24025799-24026410                       29   3.1  
03_06_0189 + 32214702-32215154                                         29   3.1  
02_04_0451 + 23021139-23021269,23021366-23021498,23021594-230217...    29   4.1  
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402...    29   4.1  
05_02_0122 - 6840840-6841307                                           29   5.4  
07_01_0130 - 963856-965454                                             28   7.1  

>03_05_0944 +
           29046793-29046922,29048091-29048464,29048556-29048687,
           29048829-29049210,29049370-29049513,29049593-29049777,
           29049925-29050051,29050603-29050676,29051071-29051147,
           29051256-29051292,29051453-29051619,29051800-29051983,
           29052053-29052130,29052451-29052570,29052648-29052707,
           29053057-29053179,29053848-29053941,29054019-29054197,
           29054737-29055039,29055373-29055474,29055553-29055693,
           29055831-29055995,29056168-29056344,29056432-29056554,
           29057787-29057867,29057983-29058099,29058214-29058386,
           29058846-29058923,29058994-29059141,29059755-29059877,
           29060015-29060071,29060145-29060255,29060382-29060573,
           29060690-29060863,29061263-29061373,29061462-29061531,
           29061734-29061812,29061898-29062000,29062086-29062256,
           29062348-29062470,29062548-29062661,29062935-29063041,
           29063117-29063168,29063245-29063351,29063589-29063703,
           29063819-29063929,29064016-29064153,29064230-29064352,
           29064535-29064606,29064774-29064886,29066780-29067110,
           29067199-29067381,29068669-29068863,29068943-29069110,
           29069208-29069340,29069511-29069595,29069726-29069765
          Length = 2591

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 755 HQSRTKLEVRRRLDTALVLTVNMSSSDPPTLL 660
           HQ+R  +E RR +  + V T++  SSDP TLL
Sbjct: 297 HQARHSVEERRIIALSTVGTLSGKSSDPDTLL 328


>07_03_1107 - 24024387-24024497,24025799-24026410
          Length = 240

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 133 KPQSPARRSFSGLPGPLGQGEHADSFXC 216
           K ++PA  S +  PGP G G  ADS  C
Sbjct: 179 KAKAPAASSTADAPGPAGDGVAADSTAC 206


>03_06_0189 + 32214702-32215154
          Length = 150

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +2

Query: 539 AAGSTPGGALPSIPLSFSFATILPPESKIFGFPEAA 646
           AA + P  ALP +P   +  T LPP   I   P+AA
Sbjct: 30  AAAAAPPAALPVLPAVPALPTTLPPMPAIPAVPQAA 65


>02_04_0451 +
           23021139-23021269,23021366-23021498,23021594-23021789,
           23023376-23023737,23024049-23024363
          Length = 378

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
 Frame = +2

Query: 422 LHQLRTAMHHHP--PNQERAVNLSILPVSGPGEISRVESN*AAGSTPGGALPSIPLSFSF 595
           LH L T     P  P +  +   +ILP   PG  S + S    G TP G +   P  F F
Sbjct: 313 LHYLSTLSPPEPLAPPRTFSSENAILPPESPGTSSLMASRGDLGDTPKGKMEDKPRGFFF 372


>01_07_0306 + 42638683-42638990,42639074-42639314,42639935-42640236,
            42640431-42640607,42640853-42641617,42641697-42641791,
            42641889-42641951,42642047-42642135,42642229-42642324,
            42642457-42643104,42643596-42643628,42643838-42643912,
            42644442-42644603,42644604-42644674,42644758-42644815,
            42645196-42645394,42645487-42645552,42645699-42646183
          Length = 1310

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = +2

Query: 116  LWGIIANPNPQHEGVSAGCPGL*ARENMLIPSXVARVRPRTSKGITDXXXXXXXXXEDAG 295
            LW +++ P P+++ +  G PG   R     P  +   R   S+G T          ++  
Sbjct: 1112 LWNVLSAPLPKNDAIDGGLPGSADR-----PKLLKLDRSPLSQGTTKWKKSDRERDQNRD 1166

Query: 296  PSKKNFNTSS 325
             S KN N+ S
Sbjct: 1167 ASLKNSNSKS 1176


>05_02_0122 - 6840840-6841307
          Length = 155

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 28  IGSSDGRCVQRAGT*STRAYDSRLLGIPRFMG 123
           +G+  G C     + ++R Y S L+G+PR +G
Sbjct: 109 VGAGGGGCTSSRASITSRVYFSGLIGLPRSIG 140


>07_01_0130 - 963856-965454
          Length = 532

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 425 HQLRTAMHHHPPNQERAVNLSILPVSGPGEISR 523
           H +   +   PPN     NL +LP+ GP ++ +
Sbjct: 195 HIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGK 227


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,906,272
Number of Sequences: 37544
Number of extensions: 550763
Number of successful extensions: 1407
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)