Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_N07
(790 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 64 1e-10
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 63 2e-10
03_05_0066 - 20455976-20456161,20456251-20456347,20456608-204567... 35 0.064
04_04_0053 + 22389227-22389613,22390528-22390981,22391618-223916... 33 0.34
04_04_1223 + 31851545-31852609,31854314-31854773,31856201-318562... 31 0.79
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474... 31 1.0
07_01_0182 + 1280479-1280754,1281232-1282089 31 1.4
02_02_0100 - 6783821-6784339,6784815-6784984,6785062-6785164,678... 31 1.4
11_02_0056 + 7828453-7828717,7829425-7829427,7829658-7829912,782... 29 4.2
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 29 5.6
03_06_0105 + 31675083-31675313,31676171-31676815 29 5.6
02_04_0289 + 21615745-21616155,21617417-21617870,21618162-216182... 29 5.6
08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195 28 7.4
02_05_0655 + 30668706-30668849,30669043-30669471 28 9.7
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 64.1 bits (149), Expect = 1e-10
Identities = 39/108 (36%), Positives = 55/108 (50%)
Frame = -2
Query: 744 RYYGXNDPVXEKLMGRXXAXXXFTXHXEDKXCYYLVCW*SSLIMSLRTSLEATFTNMVKL 565
RYYG NDPV KL+G+ T ++ + ++ I L F ++
Sbjct: 197 RYYGVNDPVALKLLGKAGEMPSLTPPDDESIRTLYIGGLNNRITE--QDLRDQFYAHGEI 254
Query: 564 DV*LLYLEPQCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKSQ 421
+ + L+ CAFV YT+R AE AAE+ N+LVI G RL + WGK Q
Sbjct: 255 ESIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGIRLKLMWGKPQ 302
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 63.3 bits (147), Expect = 2e-10
Identities = 38/108 (35%), Positives = 53/108 (49%)
Frame = -2
Query: 744 RYYGXNDPVXEKLMGRXXAXXXFTXHXEDKXCYYLVCW*SSLIMSLRTSLEATFTNMVKL 565
RYYG NDPV KL+ + T ++ + S + L F ++
Sbjct: 197 RYYGVNDPVALKLLSKAGEMPSLTPPDDESIRTLYIGGLDSRVTE--QDLRDQFYAHGEI 254
Query: 564 DV*LLYLEPQCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKSQ 421
+ + L+ CAFV YT+R AE AAE+ N+LVI G RL + WGK Q
Sbjct: 255 ETIRMVLQRACAFVTYTTREGAEKAAEELANKLVIKGVRLKLMWGKPQ 302
>03_05_0066 -
20455976-20456161,20456251-20456347,20456608-20456738,
20456814-20456869,20457498-20457543
Length = 171
Score = 35.1 bits (77), Expect = 0.064
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = -2
Query: 537 QCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKSQGRQ 412
+C FVQY++R +AE A + N + G+ + + WG+S G +
Sbjct: 69 RCGFVQYSNRASAEEAI-RMLNGSQLGGQSIRLSWGRSPGNK 109
>04_04_0053 +
22389227-22389613,22390528-22390981,22391618-22391673,
22391757-22391887,22391976-22392072,22393329-22393484
Length = 426
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 546 LEPQCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKS 424
L QC FVQ+ SR AE A + N VI + + + WG+S
Sbjct: 331 LGKQCGFVQFVSRTDAEEALQ-GLNGSVIGKQAVRLSWGRS 370
>04_04_1223 +
31851545-31852609,31854314-31854773,31856201-31856250,
31856333-31856463,31856569-31856665,31856759-31856950,
31857121-31857123
Length = 665
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 537 QCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKS 424
+C FVQY +R +AE A +I G+ + + WG+S
Sbjct: 560 RCGFVQYVNRPSAEQAL-AVLQGTLIGGQNVRLSWGRS 596
>09_04_0424 +
17444261-17444665,17445974-17446367,17447367-17447425,
17447507-17447637,17447737-17447833,17447936-17448100
Length = 416
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -2
Query: 597 LEATFTNMVKLDV*LLYLEPQCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKSQG 418
L TF+ ++ + + QC FVQ+ R AE A + N I + + + WG++
Sbjct: 301 LRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQ-GLNGSTIGKQTVRLSWGRNPA 359
Query: 417 RQGLTEKN 394
+ L N
Sbjct: 360 NKQLRSDN 367
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 616 NVTEDELRGHFYQYGEI 566
NV+ED+LR F QYGEI
Sbjct: 295 NVSEDDLRQTFSQYGEI 311
>07_01_0182 + 1280479-1280754,1281232-1282089
Length = 377
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 622 PDNVTEDELRGHFYQYGEIRCLTLV 548
P + E ELRGHF QYG +R + ++
Sbjct: 28 PTSAQEAELRGHFGQYGAVRSVIVM 52
>02_02_0100 -
6783821-6784339,6784815-6784984,6785062-6785164,
6785291-6785454,6786781-6786821,6786933-6787129
Length = 397
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 622 PDNVTEDELRGHFYQYGEI 566
P ++TEDELR HF YG+I
Sbjct: 163 PSSLTEDELREHFSPYGKI 181
>11_02_0056 +
7828453-7828717,7829425-7829427,7829658-7829912,
7829997-7830124,7831063-7831207,7832178-7832275,
7833253-7833395,7835119-7835239,7835492-7835584,
7835712-7835828
Length = 455
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 434 HLIVSLLPKITRRLKVFSAACSAAFLEVYCTKAHWGSRYKSQTS 565
HL+ S LP L V+S +FL + + ++W + + +Q S
Sbjct: 78 HLLPSPLPLGEEDLNVYSLRAGFSFLNFFTSASNWSAGFPTQNS 121
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = -2
Query: 537 QCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKSQGRQGLTEKND 391
+C FVQ+ +R +A+ A +I G+ + + WG+S + + D
Sbjct: 325 RCGFVQFANRASADEAL-VLLQGTLIGGQNVRLSWGRSPSNRQAQPQQD 372
>03_06_0105 + 31675083-31675313,31676171-31676815
Length = 291
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 622 PDNVTEDELRGHFYQYGEI 566
P E +LRGHF +YGE+
Sbjct: 13 PQQTREGDLRGHFARYGEV 31
>02_04_0289 +
21615745-21616155,21617417-21617870,21618162-21618217,
21618307-21618437,21618565-21618727
Length = 404
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 537 QCAFVQYTSRNAAEHAAEKTFNRLVIFGKRLTIKWGKS 424
QC FVQ+ +R AE A + N I + + + WG+S
Sbjct: 342 QCGFVQFVNRPDAEEALQ-GLNGSTIGKQAVRLSWGRS 378
>08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195
Length = 837
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 491 ACSAAFLEVYCTKAHWGSRYK--SQTSNFTILVKVAS 595
AC A + YC+K RY +SN T+ VKV S
Sbjct: 391 ACEIAMFDTYCSKQMLPMRYGKIDHSSNTTLFVKVYS 427
>02_05_0655 + 30668706-30668849,30669043-30669471
Length = 190
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 340 TPCIFTSIPATNATTPE----PSERFLQLAPLWWSGLGTVGSAWH 218
+PC +P A TP PS R APL SGL +GS+ H
Sbjct: 65 SPCSAPPLPTAAAYTPPHTNTPSSRRRHHAPLVRSGLRLLGSSRH 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,116,209
Number of Sequences: 37544
Number of extensions: 295433
Number of successful extensions: 926
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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