BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_M19
(781 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. 174 1e-43
M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin recept... 174 1e-43
BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p pro... 174 1e-43
AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p pro... 174 1e-43
AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FB... 174 1e-43
AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB... 174 1e-43
AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA... 174 1e-43
AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD... 174 1e-43
AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p pro... 30 4.1
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 30 4.1
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 30 4.1
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 30 4.1
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 30 4.1
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P... 29 5.4
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P... 29 5.4
>M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein.
Length = 270
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 101 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 160
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 161 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 219
>M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin receptor
protein.
Length = 253
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 84 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 143
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 144 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 202
>BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p
protein.
Length = 270
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 101 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 160
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 161 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 219
>AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p
protein.
Length = 270
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 101 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 160
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 161 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 219
>AL031027-8|CAA19839.1| 270|Drosophila melanogaster
EG:80H7.6,FBgn0003517;sta protein.
Length = 270
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 101 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 160
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 161 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 219
>AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB,
isoform B protein.
Length = 270
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 101 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 160
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 161 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 219
>AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA,
isoform A protein.
Length = 270
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 101 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 160
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 161 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 219
>AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD,
isoform D protein.
Length = 313
Score = 174 bits (423), Expect = 1e-43
Identities = 82/119 (68%), Positives = 88/119 (73%)
Frame = -3
Query: 674 GXXTXGXXXNQIQXAFXEXXXLXVXDXAQDHQPIXEXSYVNIPVIXXCNTDSPXRFVDIA 495
G T G NQIQ AF E L V D DHQPI E SYVNIPVI NTDSP R++DIA
Sbjct: 144 GRFTPGAFTNQIQPAFREPRLLVVTDPNTDHQPIMEASYVNIPVIAFTNTDSPLRYIDIA 203
Query: 494 IPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAKE 318
IPCN KS+HSIGLMWWLLAREVLRLRG + R W VVVDLFFYRDPEE+EK+E AKE
Sbjct: 204 IPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVVVDLFFYRDPEEAEKEEAAAKE 262
>AY051776-1|AAK93200.1| 1022|Drosophila melanogaster LD30146p
protein.
Length = 1022
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LVPGQTILLEQGVLQKQELQRVQQ 214
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 695 LSPGQTIVTQRNVPQSQALQMVQQ 718
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LVPGQTILLEQGVLQKQELQRVQQ 214
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LVPGQTILLEQGVLQKQELQRVQQ 214
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LVPGQTILLEQGVLQKQELQRVQQ 214
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1832 LSPGQTIVTQRNVPQSQALQMVQQ 1855
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 143 LVPGQTILLEQGVLQKQELQRVQQ 214
L PGQTI+ ++ V Q Q LQ VQQ
Sbjct: 1812 LSPGQTIVTQRNVPQSQALQMVQQ 1835
>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
isoform B protein.
Length = 2922
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 210 CTRCSSCFWSTPCSRRMVCPGTR*VE-YNCRRT-SRRHRSA 94
C +CSS F++ P +R++CP V CR+ R+H +
Sbjct: 2627 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS 2667
>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
isoform A protein.
Length = 2594
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 210 CTRCSSCFWSTPCSRRMVCPGTR*VE-YNCRRT-SRRHRSA 94
C +CSS F++ P +R++CP V CR+ R+H +
Sbjct: 2299 CIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS 2339
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,060,946
Number of Sequences: 53049
Number of extensions: 460933
Number of successful extensions: 1241
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -