Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_M18
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0022 + 151233-151515,152632-152852,153579-153656,154558-15...    29   4.2  
06_01_0836 - 6344751-6345084,6345506-6345795                           29   4.2  
06_01_0196 + 1520015-1520191,1520483-1520527,1521851-1521910,152...    29   4.2  
10_08_0898 + 21424379-21424792,21424974-21425723                       28   7.3  
01_01_0060 + 477667-477816,479312-479722                               28   7.3  
01_06_0583 + 30400317-30401681                                         28   9.7  

>11_01_0022 +
           151233-151515,152632-152852,153579-153656,154558-154674,
           155970-156316,156504-157032
          Length = 524

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 550 NLKGFQVGAGCVSEHYACIR 609
           N   +QVG GC+S+ Y C+R
Sbjct: 348 NATNYQVGTGCLSDIYFCLR 367


>06_01_0836 - 6344751-6345084,6345506-6345795
          Length = 207

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 423 EKAARHENPLIVAAGNYIPDPVDRMVNRRRPQST 322
           EK A HE+ LI   GN++  P D     R P +T
Sbjct: 165 EKEATHEDLLIPNTGNFVETPYDVDCMERMPTNT 198


>06_01_0196 +
           1520015-1520191,1520483-1520527,1521851-1521910,
           1522246-1522358,1522432-1522642,1523087-1523133,
           1523211-1523369,1523521-1523624,1524300-1524634
          Length = 416

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 241 SDGFDEDGDRCLWCLKAP 294
           SDGFDE  D C  CL+ P
Sbjct: 282 SDGFDEGADACAVCLERP 299


>10_08_0898 + 21424379-21424792,21424974-21425723
          Length = 387

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 281 HHKHRSPSSSNPSLATKGSTSELTHRHSPLSFSPD 177
           HH H       PS AT  +TS   H+ S LSF+ D
Sbjct: 101 HHHHHIGGMGEPSGATPSATSS-DHQTSMLSFADD 134


>01_01_0060 + 477667-477816,479312-479722
          Length = 186

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 284 RHHKHRS-PSSSNPSLATKGSTSELTHRHSPLSFSPDL 174
           RHH H S  SSS+P  +TK + ++L H     ++   L
Sbjct: 32  RHHHHYSTSSSSSPPSSTKEAVTQLDHLEQAAAYIKQL 69


>01_06_0583 + 30400317-30401681
          Length = 454

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +3

Query: 300 GSGGSVMACFGDVDGLPFGLLGRVC 374
           G  G+     G VDG PF LLG  C
Sbjct: 420 GVTGAAATVRGSVDGYPFRLLGHAC 444


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,973,966
Number of Sequences: 37544
Number of extensions: 463003
Number of successful extensions: 1278
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)