Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_M03
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p pro...    29   7.4  
AY071688-1|AAL49310.1|  947|Drosophila melanogaster RH10407p pro...    29   7.4  
AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-P...    29   7.4  
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    29   7.4  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    29   7.4  

>AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 322 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 170
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


>AY071688-1|AAL49310.1|  947|Drosophila melanogaster RH10407p
           protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 29/96 (30%), Positives = 43/96 (44%)
 Frame = -2

Query: 361 GQNGKQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSP 182
           G NG  S++  +   G+S  TNG     KH     + P  ATK +    +  +SP + S 
Sbjct: 385 GGNGGGSSNISSSG-GASSGTNGLLD--KHE--LDALPQAATKSAGDGFSHSNSPTANSG 439

Query: 181 DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 74
              +GSR   G     +  L   +L +SSG +P  S
Sbjct: 440 AGATGSRDNDGPSSSNSSHLYQNLLRSSSGETPAGS 475


>AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-PA
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 322 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 170
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 29/96 (30%), Positives = 43/96 (44%)
 Frame = -2

Query: 361 GQNGKQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSP 182
           G NG  S++  +   G+S  TNG     KH     + P  ATK +    +  +SP + S 
Sbjct: 385 GGNGGGSSNISSSG-GASSGTNGLLD--KHE--LDALPQAATKSAGDGFSHSNSPTANSG 439

Query: 181 DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 74
              +GSR   G     +  L   +L +SSG +P  S
Sbjct: 440 AGATGSRDNDGPSSSNSSHLYQNLLRSSSGETPAGS 475


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 29/96 (30%), Positives = 43/96 (44%)
 Frame = -2

Query: 361 GQNGKQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSP 182
           G NG  S++  +   G+S  TNG     KH     + P  ATK +    +  +SP + S 
Sbjct: 656 GGNGGGSSNISSSG-GASSGTNGLLD--KHE--LDALPQAATKSAGDGFSHSNSPTANSG 710

Query: 181 DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 74
              +GSR   G     +  L   +L +SSG +P  S
Sbjct: 711 AGATGSRDNDGPSSSNSSHLYQNLLRSSSGETPAGS 746


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,978,569
Number of Sequences: 53049
Number of extensions: 626484
Number of successful extensions: 2007
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2006
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)