Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_L22
(792 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 72 1e-12
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 72 1e-12
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 69 7e-12
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 62 1e-09
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 62 1e-09
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 53 4e-07
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 52 1e-06
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 46 4e-05
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 46 4e-05
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 46 4e-05
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 46 6e-05
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 45 1e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 45 1e-04
BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p pro... 32 0.78
BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p pro... 32 0.78
AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA ... 32 0.78
AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P... 31 1.8
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P... 31 1.8
AY069512-1|AAL39657.1| 857|Drosophila melanogaster LD23217p pro... 31 2.4
X13104-2|CAB57787.1| 629|Drosophila melanogaster labial protein... 30 3.2
X13104-1|CAB57786.1| 635|Drosophila melanogaster labial protein... 30 3.2
X13103-1|CAA31495.1| 495|Drosophila melanogaster F24 protein (l... 30 3.2
AY095089-1|AAM11417.1| 629|Drosophila melanogaster RE63854p pro... 30 3.2
AE014297-495|AAF54098.1| 629|Drosophila melanogaster CG1264-PA ... 30 3.2
AE001572-21|AAD19811.1| 629|Drosophila melanogaster homeodomain... 30 3.2
AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p pro... 30 4.2
AE014297-3591|AAS65210.1| 715|Drosophila melanogaster CG6695-PB... 30 4.2
AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA... 30 4.2
AE014296-621|AAF47752.1| 905|Drosophila melanogaster CG12009-PA... 29 5.5
AY061826-1|AAL27637.1| 388|Drosophila melanogaster GH21984p pro... 29 7.3
AE014296-3519|AAF51708.2| 388|Drosophila melanogaster CG7605-PA... 29 7.3
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 71.7 bits (168), Expect = 1e-12
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
K LY + ++P+ TY S ++ +A+R+N+ +Q Q R RI GAPW+ RN ++H DL++
Sbjct: 782 KALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKI 841
Query: 469 DPVSKYLQSASLRHFEKAARHENPL 395
V + + ++ EK H NPL
Sbjct: 842 KLVIEVIAEKKTKYNEKLTTHTNPL 866
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 71.7 bits (168), Expect = 1e-12
Identities = 31/85 (36%), Positives = 51/85 (60%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
K LY + ++P+ TY S ++ +A+R+N+ +Q Q R RI GAPW+ RN ++H DL++
Sbjct: 782 KALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKI 841
Query: 469 DPVSKYLQSASLRHFEKAARHENPL 395
V + + ++ EK H NPL
Sbjct: 842 KLVIEVIAEKKTKYNEKLTTHTNPL 866
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 68.9 bits (161), Expect = 7e-12
Identities = 39/115 (33%), Positives = 59/115 (51%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
K+T+YK + P Y ++ A +++K +Q IQ + R+ G WF RN LH DL+L
Sbjct: 791 KLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKL 850
Query: 469 DPVSKYLQSASLRHFEKAARHENPLVVAAGNYIPDPVDRLVNRRRRPKHVITDPP 305
V + S R+ ++ RH N L A P R +N RR+P+ +IT P
Sbjct: 851 ATVFDEINKHSSRYHDRLERHRNRLASALNRSRP---PRRLN-RRQPRDLITRSP 901
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 61.7 bits (143), Expect = 1e-09
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
KV +YK+ + P + Y V+ AA+++L ++++Q + R GAPW+ R D+ DL++
Sbjct: 796 KVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKV 855
Query: 469 DPVSKYLQSASLRHFEKAARHENPLVVAAGNYIPDPVD-RLVNRRRRPKHVITDPPD 302
+ LQ+ + ++ E+ H N L G D R +RR +H D P+
Sbjct: 856 PKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 61.7 bits (143), Expect = 1e-09
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
KV +YK+ + P + Y V+ AA+++L ++++Q + R GAPW+ R D+ DL++
Sbjct: 598 KVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKV 657
Query: 469 DPVSKYLQSASLRHFEKAARHENPLVVAAGNYIPDPVD-RLVNRRRRPKHVITDPPD 302
+ LQ+ + ++ E+ H N L G D R +RR +H D P+
Sbjct: 658 PKLGDKLQNIAQKYLERLNVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 53.2 bits (122), Expect = 4e-07
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
K +Y C+ P+ Y ++ AA++N +QV+Q R R P++ R LH DL L
Sbjct: 797 KRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNL 856
Query: 469 DPVSKYLQSASLRHFEKAARHENPL 395
V + + + R+ ++ RH + L
Sbjct: 857 HTVEEQISRHTSRYSDRLRRHHSIL 881
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 51.6 bits (118), Expect = 1e-06
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
KV LY + ++P+ TY S ++ +A+ +N+ +Q Q + R GAPW+ R+ ++ DL +
Sbjct: 784 KVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNI 843
Query: 469 DPVS 458
V+
Sbjct: 844 PSVT 847
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 4e-05
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = -3
Query: 661 PSVXKVTLYKTCIRPVMTYASVVFAH-AARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLH 485
P K+ L+K + P+ YA ++ + T K +Q ++ ++ R + A + R D+
Sbjct: 850 PKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIR 909
Query: 484 DDLELDPVSKYLQSASLRHFEKAARHENPLV--VAAGNYIPDPVDRLVNR 341
+ + AS R+ HENPL+ + Y P+ ++ NR
Sbjct: 910 TKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 4e-05
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = -3
Query: 661 PSVXKVTLYKTCIRPVMTYASVVFAH-AARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLH 485
P K+ L+K + P+ YA ++ + T K +Q ++ ++ R + A + R D+
Sbjct: 850 PKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIR 909
Query: 484 DDLELDPVSKYLQSASLRHFEKAARHENPLV--VAAGNYIPDPVDRLVNR 341
+ + AS R+ HENPL+ + Y P+ ++ NR
Sbjct: 910 TKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 46.4 bits (105), Expect = 4e-05
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = -3
Query: 661 PSVXKVTLYKTCIRPVMTYASVVFAH-AARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLH 485
P K+ L+K + P+ YA ++ + T K +Q ++ ++ R + A + R D+
Sbjct: 850 PKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIR 909
Query: 484 DDLELDPVSKYLQSASLRHFEKAARHENPLV--VAAGNYIPDPVDRLVNR 341
+ + AS R+ HENPL+ + Y P+ ++ NR
Sbjct: 910 TKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 959
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 46.0 bits (104), Expect = 6e-05
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = -3
Query: 661 PSVXKVTLYKTCIRPVMTYASVVFAH-AARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLH 485
P K+ L+K + P+ YA ++ + T K +Q ++ ++ R + A + R D+
Sbjct: 403 PKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIRRIINASRYTRQADIR 462
Query: 484 DDLELDPVSKYLQSASLRHFEKAARHENPLV--VAAGNYIPDPVDRLVNR 341
+ + AS R+ HENPL+ + Y P+ ++ NR
Sbjct: 463 TKYNIKSFDETFDKASQRYANSLTDHENPLIYDLLINAYKPNRLELSKNR 512
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
K+ ++KT P++ Y S V+ A+T++K LQ+ Q + ++ + P++ LH +
Sbjct: 816 KIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGV 875
Query: 469 DPVSKYLQ 446
V + +Q
Sbjct: 876 QKVQQKIQ 883
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 44.8 bits (101), Expect = 1e-04
Identities = 18/68 (26%), Positives = 37/68 (54%)
Frame = -3
Query: 649 KVTLYKTCIRPVMTYASVVFAHAARTNLKPLQVIQFRFCRIAVGAPWFQRNVDLHDDLEL 470
K+ ++KT P++ Y S V+ A+T++K LQ+ Q + ++ + P++ LH +
Sbjct: 764 KIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGV 823
Query: 469 DPVSKYLQ 446
V + +Q
Sbjct: 824 QKVQQKIQ 831
>BT015281-1|AAT94510.1| 1489|Drosophila melanogaster LD08594p protein.
Length = 1489
Score = 32.3 bits (70), Expect = 0.78
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -2
Query: 389 GRRKLHTRSCRPFGKPSTSPKARHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELT 210
G K + S P P TSP HG T+ R+Y RSP SP PS + +TS +
Sbjct: 1376 GSPKRRSFSMSPTPPPGTSPPPHKHGRGRQTS-TNRRYA-RSP-SPAPSPRNERATSPVQ 1432
Query: 209 HRHS--PLSFSPDLLSG 165
HS S +P+ ++G
Sbjct: 1433 SVHSRRSRSHTPNRING 1449
>BT011124-1|AAR82791.1| 1489|Drosophila melanogaster LD09942p protein.
Length = 1489
Score = 32.3 bits (70), Expect = 0.78
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -2
Query: 389 GRRKLHTRSCRPFGKPSTSPKARHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELT 210
G K + S P P TSP HG T+ R+Y RSP SP PS + +TS +
Sbjct: 1376 GSPKRRSFSMSPTPPPGTSPPPHKHGRGRQTS-TNRRYA-RSP-SPAPSPRNERATSPVQ 1432
Query: 209 HRHS--PLSFSPDLLSG 165
HS S +P+ ++G
Sbjct: 1433 SVHSRRSRSHTPNRING 1449
>AE014297-286|AAF52001.1| 2296|Drosophila melanogaster CG2926-PA
protein.
Length = 2296
Score = 32.3 bits (70), Expect = 0.78
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = -2
Query: 389 GRRKLHTRSCRPFGKPSTSPKARHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELT 210
G K + S P P TSP HG T+ R+Y RSP SP PS + +TS +
Sbjct: 1376 GSPKRRSFSMSPTPPPGTSPPPHKHGRGRQTS-TNRRYA-RSP-SPAPSPRNERATSPVQ 1432
Query: 209 HRHS--PLSFSPDLLSG 165
HS S +P+ ++G
Sbjct: 1433 SVHSRRSRSHTPNRING 1449
>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
isoform B protein.
Length = 1006
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -2
Query: 401 PSCRGRRKLHTRSCRPFGKPSTSPKARHHGSS*S-TNGAFRQYKHRSPSSPNPSLATKGS 225
P K H + + T P + HH S T+G +R+ + SSP ++ GS
Sbjct: 149 PMNGSNEKRHESNGKSSSSGGTGPGSHHHHQLQSQTSGGYREGRRHETSSPKRFSSSLGS 208
Query: 224 TSELTHRHSPLSFSPDLLSG 165
+ + R S S L++G
Sbjct: 209 DTGNSTRESECSEEHGLVAG 228
>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
isoform A protein.
Length = 1006
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -2
Query: 401 PSCRGRRKLHTRSCRPFGKPSTSPKARHHGSS*S-TNGAFRQYKHRSPSSPNPSLATKGS 225
P K H + + T P + HH S T+G +R+ + SSP ++ GS
Sbjct: 149 PMNGSNEKRHESNGKSSSSGGTGPGSHHHHQLQSQTSGGYREGRRHETSSPKRFSSSLGS 208
Query: 224 TSELTHRHSPLSFSPDLLSG 165
+ + R S S L++G
Sbjct: 209 DTGNSTRESECSEEHGLVAG 228
>AY069512-1|AAL39657.1| 857|Drosophila melanogaster LD23217p
protein.
Length = 857
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -2
Query: 380 KLHTRSCRPFGKPSTSPKARHHGSS*S-TNGAFRQYKHRSPSSPNPSLATKGSTSELTHR 204
K H + + T P + HH S T+G +R+ + SSP ++ GS + + R
Sbjct: 7 KRHESNGKSSSSGGTGPGSHHHHQLQSQTSGGYREGRRHETSSPKRFSSSLGSDTGNSTR 66
Query: 203 HSPLSFSPDLLSG 165
S S L++G
Sbjct: 67 ESECSEEHGLVAG 79
>X13104-2|CAB57787.1| 629|Drosophila melanogaster labial protein
protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 359 RPFGKPSTSPKA--RHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
+P + SP A +HH +S S NG + + SP S ++ S S H S S
Sbjct: 322 QPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSK 381
Query: 185 SPDLLSGSRFRFRW 144
SP+ S S ++W
Sbjct: 382 SPN-HSSSIPTYKW 394
>X13104-1|CAB57786.1| 635|Drosophila melanogaster labial protein
protein.
Length = 635
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 359 RPFGKPSTSPKA--RHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
+P + SP A +HH +S S NG + + SP S ++ S S H S S
Sbjct: 322 QPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSK 381
Query: 185 SPDLLSGSRFRFRW 144
SP+ S S ++W
Sbjct: 382 SPN-HSSSIPTYKW 394
>X13103-1|CAA31495.1| 495|Drosophila melanogaster F24 protein (long
form) (AA 141-629) protein.
Length = 495
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 359 RPFGKPSTSPKA--RHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
+P + SP A +HH +S S NG + + SP S ++ S S H S S
Sbjct: 182 QPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSK 241
Query: 185 SPDLLSGSRFRFRW 144
SP+ S S ++W
Sbjct: 242 SPN-HSSSIPTYKW 254
>AY095089-1|AAM11417.1| 629|Drosophila melanogaster RE63854p
protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 359 RPFGKPSTSPKA--RHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
+P + SP A +HH +S S NG + + SP S ++ S S H S S
Sbjct: 322 QPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSK 381
Query: 185 SPDLLSGSRFRFRW 144
SP+ S S ++W
Sbjct: 382 SPN-HSSSIPTYKW 394
>AE014297-495|AAF54098.1| 629|Drosophila melanogaster CG1264-PA
protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 359 RPFGKPSTSPKA--RHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
+P + SP A +HH +S S NG + + SP S ++ S S H S S
Sbjct: 322 QPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSK 381
Query: 185 SPDLLSGSRFRFRW 144
SP+ S S ++W
Sbjct: 382 SPN-HSSSIPTYKW 394
>AE001572-21|AAD19811.1| 629|Drosophila melanogaster homeodomain
protein protein.
Length = 629
Score = 30.3 bits (65), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -2
Query: 359 RPFGKPSTSPKA--RHHGSS*STNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
+P + SP A +HH +S S NG + + SP S ++ S S H S S
Sbjct: 322 QPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSK 381
Query: 185 SPDLLSGSRFRFRW 144
SP+ S S ++W
Sbjct: 382 SPN-HSSSIPTYKW 394
>AY118441-1|AAM48470.1| 961|Drosophila melanogaster SD06668p
protein.
Length = 961
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 392 RGRRKLHTRS-CRPFGKPSTSPKARHHGSS*STNGAFRQYKHRSPS 258
R RR+ ++RS R + + ++R S S +G++++YK RSPS
Sbjct: 462 RRRRRYYSRSRSRSRSRSRSLSRSRSRSRSRSRSGSWKRYKARSPS 507
>AE014297-3591|AAS65210.1| 715|Drosophila melanogaster CG6695-PB,
isoform B protein.
Length = 715
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 392 RGRRKLHTRS-CRPFGKPSTSPKARHHGSS*STNGAFRQYKHRSPS 258
R RR+ ++RS R + + ++R S S +G++++YK RSPS
Sbjct: 462 RRRRRYYSRSRSRSRSRSRSLSRSRSRSRSRSRSGSWKRYKARSPS 507
>AE014297-3590|AAF56321.3| 961|Drosophila melanogaster CG6695-PA,
isoform A protein.
Length = 961
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 392 RGRRKLHTRS-CRPFGKPSTSPKARHHGSS*STNGAFRQYKHRSPS 258
R RR+ ++RS R + + ++R S S +G++++YK RSPS
Sbjct: 462 RRRRRYYSRSRSRSRSRSRSLSRSRSRSRSRSRSGSWKRYKARSPS 507
>AE014296-621|AAF47752.1| 905|Drosophila melanogaster CG12009-PA
protein.
Length = 905
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1
Query: 255 AEPVACDEGLDERINPQTQPTE---FLAGSSQWVALPI 151
AEP++ + E++ P++QPTE AG + V LPI
Sbjct: 811 AEPMSLVQSTPEQLEPESQPTEEAASTAGQEEEVILPI 848
>AY061826-1|AAL27637.1| 388|Drosophila melanogaster GH21984p
protein.
Length = 388
Score = 29.1 bits (62), Expect = 7.3
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 359 RPFGKPSTSPKARHHGSS*S--TNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
RPFG S +P A S S T +Q +H +PS + S + S H HS LS
Sbjct: 54 RPFGDGSYNPPAAPASVSASITTTTTQQQQQHHNPSHHHQSSHHQPSHHHHHHHHSQLSL 113
Query: 185 S 183
+
Sbjct: 114 T 114
>AE014296-3519|AAF51708.2| 388|Drosophila melanogaster CG7605-PA
protein.
Length = 388
Score = 29.1 bits (62), Expect = 7.3
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 359 RPFGKPSTSPKARHHGSS*S--TNGAFRQYKHRSPSSPNPSLATKGSTSELTHRHSPLSF 186
RPFG S +P A S S T +Q +H +PS + S + S H HS LS
Sbjct: 54 RPFGDGSYNPPAAPASVSASITTTTTQQQQQHHNPSHHHQSSHHQPSHHHHHHHHSQLSL 113
Query: 185 S 183
+
Sbjct: 114 T 114
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,974,109
Number of Sequences: 53049
Number of extensions: 754324
Number of successful extensions: 2363
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2363
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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