Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_L16
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    35   0.003
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    28   0.29 
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.0  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.7  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   3.5  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   4.7  
AY745220-1|AAU93487.1|  101|Anopheles gambiae cytochrome P450 pr...    23   8.1  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
 Frame = -2

Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGA 620
           W+      +S ++ +  +P D QT   KFGS   N D++   +  +K    +   ++SG 
Sbjct: 141 WVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGT 200

Query: 619 WDVTALSSAVQSQDRGEVEARVAMF 545
           WD+  + + +   +    E  +  +
Sbjct: 201 WDIIEVPAYLNVYEGNPTETDITFY 225


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 28.3 bits (60), Expect = 0.29
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 588  RARTVARWKLAWQCSRCLSGDAPRHTRW 505
            R  T+  W+  W     L  DA RHTRW
Sbjct: 930  RQNTIDCWQEEWDAD-ALQQDASRHTRW 956


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 588 RARTVARWKLAWQCSRCLSGDAPRHTRW 505
           R  T+ +W+  W        D  RHTRW
Sbjct: 870 RQATIEQWQQQWDAE----ADTSRHTRW 893


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 588  RARTVARWKLAWQCSRCLSGDAPRHTRW 505
            R RT+  W+  W        D  R+TRW
Sbjct: 937  RQRTITMWQSQWDAE----ADTSRYTRW 960


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -2

Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI--DKRIYSMFESGAWDV 611
           W+   +      + +  WP D Q    K GS   +   ++  I  + +I ++  +  W +
Sbjct: 152 WVPPTEYHAFCELNMRLWPFDYQKCIVKIGSWTFDGYMLNLTIGSEPQIETLVSNSEWKI 211

Query: 610 TALS 599
             +S
Sbjct: 212 AKIS 215


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 54   FYNITSQEHGTSIRGRGCSMDPLDC 128
            F NITS+   ++   + C+ D LDC
Sbjct: 930  FINITSKCTASTTCKKNCASDELDC 954



 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 559  ELPPRHGPGSAPHWTEPSHPT 621
            ELPP H   + P + + S PT
Sbjct: 1077 ELPPEHSDVTTPDYDQRSTPT 1097


>AY745220-1|AAU93487.1|  101|Anopheles gambiae cytochrome P450
           protein.
          Length = 101

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 65  YVPGARHFHPRSWLQYGSLRL*KDRVGAGQK 157
           Y P    F P  WL+ G L+       AGQK
Sbjct: 12  YFPEPDRFVPERWLKRGELKEHSGCPHAGQK 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,879
Number of Sequences: 2352
Number of extensions: 8941
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)