Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_L16
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08415-1|CAA69692.1| 502|Homo sapiens nicotinic acetylcholine r... 38 0.031
X53179-1|CAA37320.1| 502|Homo sapiens precursor peptide (AA -25... 38 0.031
U62437-1|AAB40115.1| 502|Homo sapiens nicotinic acetylcholine r... 38 0.031
BC075041-1|AAH75041.1| 502|Homo sapiens cholinergic receptor, n... 38 0.031
BC075040-1|AAH75040.1| 502|Homo sapiens cholinergic receptor, n... 38 0.031
AL592078-3|CAI16184.1| 502|Homo sapiens cholinergic receptor, n... 38 0.031
AJ001935-1|CAA05108.1| 504|Homo sapiens CHRNB2 protein. 38 0.031
AF077186-1|AAD45422.1| 502|Homo sapiens neuronal nicotinic acet... 38 0.031
Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine r... 36 0.17
U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine r... 36 0.17
M83712-1|AAA58357.1| 468|Homo sapiens nicotinic receptor alpha ... 36 0.17
BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor, n... 36 0.17
AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic acet... 36 0.17
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 36 0.22
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 36 0.22
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 36 0.22
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 36 0.22
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 36 0.22
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 36 0.22
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 36 0.22
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 36 0.22
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 33 0.89
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 33 0.89
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 33 0.89
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 33 0.89
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 33 0.89
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 33 0.89
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 33 0.89
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 33 0.89
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 33 0.89
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 33 0.89
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 33 0.89
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 33 0.89
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 33 0.89
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 33 0.89
L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine recep... 32 2.7
BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid... 32 2.7
BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid... 32 2.7
BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid... 32 2.7
>Y08415-1|CAA69692.1| 502|Homo sapiens nicotinic acetylcholine
receptor beta2 subunit precursor protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>X53179-1|CAA37320.1| 502|Homo sapiens precursor peptide (AA -25 to
477) protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>U62437-1|AAB40115.1| 502|Homo sapiens nicotinic acetylcholine
receptor beta2 subunit precursor protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>BC075041-1|AAH75041.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>BC075040-1|AAH75040.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>AL592078-3|CAI16184.1| 502|Homo sapiens cholinergic receptor,
nicotinic, beta 2 (neuronal) protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>AJ001935-1|CAA05108.1| 504|Homo sapiens CHRNB2 protein.
Length = 504
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>AF077186-1|AAD45422.1| 502|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 2 protein.
Length = 502
Score = 38.3 bits (85), Expect = 0.031
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ ++P D Q T KF S ++ E+D V+ + S+ + SG WD
Sbjct: 145 WLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWD 204
Query: 613 VTAL 602
+ AL
Sbjct: 205 IVAL 208
>Y08419-1|CAA69696.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV-----IDKRIYSMFESG 623
+W + +S ++ + +P D+Q + KFGS ++ ++D + +DKR F++G
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDVDKR--DFFDNG 216
Query: 622 AWDVTALSSA 593
W++ + + +
Sbjct: 217 EWEIVSATGS 226
>U62434-1|AAB40112.1| 468|Homo sapiens nicotinic acetylcholine
receptor alpha5 subunit precursor protein.
Length = 468
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV-----IDKRIYSMFESG 623
+W + +S ++ + +P D+Q + KFGS ++ ++D + +DKR F++G
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDVDKR--DFFDNG 216
Query: 622 AWDVTALSSA 593
W++ + + +
Sbjct: 217 EWEIVSATGS 226
>M83712-1|AAA58357.1| 468|Homo sapiens nicotinic receptor alpha 5
subunit protein.
Length = 468
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV-----IDKRIYSMFESG 623
+W + +S ++ + +P D+Q + KFGS ++ ++D + +DKR F++G
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDVDKR--DFFDNG 216
Query: 622 AWDVTALSSA 593
W++ + + +
Sbjct: 217 EWEIVSATGS 226
>BC033639-1|AAH33639.1| 468|Homo sapiens cholinergic receptor,
nicotinic, alpha 5 protein.
Length = 468
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV-----IDKRIYSMFESG 623
+W + +S ++ + +P D+Q + KFGS ++ ++D + +DKR F++G
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDVDKR--DFFDNG 216
Query: 622 AWDVTALSSA 593
W++ + + +
Sbjct: 217 EWEIVSATGS 226
>AJ306481-1|CAC34820.1| 468|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-5subunit protein.
Length = 468
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV-----IDKRIYSMFESG 623
+W + +S ++ + +P D+Q + KFGS ++ ++D + +DKR F++G
Sbjct: 159 TWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDIILEDQDVDKR--DFFDNG 216
Query: 622 AWDVTALSSA 593
W++ + + +
Sbjct: 217 EWEIVSATGS 226
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 143 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 202
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 203 IVALPGRRTVNPQDPSYVD 221
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 96 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 155
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 156 IVALPGRRTVNPQDPSYVD 174
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 143 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 202
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 203 IVALPGRRTVNPQDPSYVD 221
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 143 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 202
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 203 IVALPGRRTVNPQDPSYVD 221
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 143 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 202
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 203 IVALPGRRTVNPQDPSYVD 221
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 143 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 202
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 203 IVALPGRRTVNPQDPSYVD 221
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 142 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 201
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 202 IVALPGRRTVNPQDPSYVD 220
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 35.5 bits (78), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -2
Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVIDKRIYSMFE---SGAWD 614
W+ ++ +++ +P D Q T KF S ++ E+D V+ SM + SG WD
Sbjct: 143 WLPPAIYKSACKIEVKYFPFDQQNCTLKFRSWTYDHTEIDMVLMTPTASMDDFTPSGEWD 202
Query: 613 VTALSS--AVQSQDRGEVE 563
+ AL V QD V+
Sbjct: 203 IVALPGRRTVNPQDPSYVD 221
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 146 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 205
Query: 616 DV 611
+
Sbjct: 206 AI 207
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 117 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 176
Query: 616 DV 611
+
Sbjct: 177 AI 178
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 147 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 206
Query: 616 DV 611
+
Sbjct: 207 AI 208
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 145 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 204
Query: 616 DV 611
+
Sbjct: 205 AI 206
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 146 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 205
Query: 616 DV 611
+
Sbjct: 206 AI 207
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 207
Query: 616 DV 611
+
Sbjct: 208 AI 209
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 207
Query: 616 DV 611
+
Sbjct: 208 AI 209
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 147 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 206
Query: 616 DV 611
+
Sbjct: 207 AI 208
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 207
Query: 616 DV 611
+
Sbjct: 208 AI 209
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 207
Query: 616 DV 611
+
Sbjct: 208 AI 209
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 207
Query: 616 DV 611
+
Sbjct: 208 AI 209
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 148 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 207
Query: 616 DV 611
+
Sbjct: 208 AI 209
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 147 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 206
Query: 616 DV 611
+
Sbjct: 207 AI 208
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.89
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 787 SWIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI---DKRIYSMFESGAW 617
+WI +S + + +P D Q T KFGS ++ ++D V+ + +ESG W
Sbjct: 142 TWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEW 201
Query: 616 DV 611
+
Sbjct: 202 AI 203
>L08485-1|AAA58490.1| 462|Homo sapiens GABA-benzodiazepine receptor
alpha-5-subunit protein.
Length = 462
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 775 RLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV 659
RL IS MQL+++P D KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
>BT009830-1|AAP88832.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 775 RLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV 659
RL IS MQL+++P D KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
>BC113422-1|AAI13423.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5 protein.
Length = 462
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 775 RLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV 659
RL IS MQL+++P D KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
>BC111979-1|AAI11980.1| 462|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, alpha 5, precursor protein.
Length = 462
Score = 31.9 bits (69), Expect = 2.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 775 RLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFV 659
RL IS MQL+++P D KFGS + + E+ +V
Sbjct: 166 RLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYV 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,085,651
Number of Sequences: 237096
Number of extensions: 1231508
Number of successful extensions: 3735
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3727
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -