Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_L16
         (788 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07956-1|CAA30778.1|  521|Drosophila melanogaster protein ( D. m...    33   0.34 
X04016-3|CAA27641.1|  521|Drosophila melanogaster nicotinic AChR...    33   0.34 
M20316-1|AAA28311.1|  521|Drosophila melanogaster protein ( D.me...    33   0.34 
AE014296-848|AAF47900.1|  521|Drosophila melanogaster CG11348-PA...    33   0.34 
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    30   4.1  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    30   4.1  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    30   4.1  

>X07956-1|CAA30778.1|  521|Drosophila melanogaster protein ( D.
           melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
           gARD5) for nicotinicacetylcholine receptor. ).
          Length = 521

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -2

Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGA 620
           W+      +S ++ +  +P D QT   KFGS   N D++   +  +K    +   ++SG 
Sbjct: 142 WVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGT 201

Query: 619 WDV 611
           WD+
Sbjct: 202 WDI 204


>X04016-3|CAA27641.1|  521|Drosophila melanogaster nicotinic AChR
           protein.
          Length = 521

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -2

Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGA 620
           W+      +S ++ +  +P D QT   KFGS   N D++   +  +K    +   ++SG 
Sbjct: 142 WVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGT 201

Query: 619 WDV 611
           WD+
Sbjct: 202 WDI 204


>M20316-1|AAA28311.1|  521|Drosophila melanogaster protein (
           D.melanogaster acetylcholinereceptor-related protein
           mRNA, complete cds. ).
          Length = 521

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -2

Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGA 620
           W+      +S ++ +  +P D QT   KFGS   N D++   +  +K    +   ++SG 
Sbjct: 142 WVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGT 201

Query: 619 WDV 611
           WD+
Sbjct: 202 WDI 204


>AE014296-848|AAF47900.1|  521|Drosophila melanogaster CG11348-PA,
           isoform A protein.
          Length = 521

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -2

Query: 784 WIKRLDISTSISMQLDNWPNDMQTXTFKFGSRMHNSDEMDFVI--DKRIYSM---FESGA 620
           W+      +S ++ +  +P D QT   KFGS   N D++   +  +K    +   ++SG 
Sbjct: 142 WVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGT 201

Query: 619 WDV 611
           WD+
Sbjct: 202 WDI 204


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 230 HAPHHALCSHDHSGSGVRSQVLERLEMR 313
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 230 HAPHHALCSHDHSGSGVRSQVLERLEMR 313
           H PHH    H H+G+G   Q  E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 230  HAPHHALCSHDHSGSGVRSQVLERLEMR 313
            H PHH    H H+G+G   Q  E+L+++
Sbjct: 945  HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,817,324
Number of Sequences: 53049
Number of extensions: 400685
Number of successful extensions: 1402
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)