Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_K23
         (811 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0059 - 394001-394708                                             36   0.038
01_01_0070 - 542603-542686,542803-543441                               33   0.36 
09_04_0180 + 15367737-15367755,15368874-15369739                       29   5.8  

>08_01_0059 - 394001-394708
          Length = 235

 Score = 35.9 bits (79), Expect = 0.038
 Identities = 21/56 (37%), Positives = 22/56 (39%)
 Frame = +2

Query: 638 PXPRXXXPLXXGPPXXXPSXRRXXLXPSPALXPXXXPXXXWXAXXPXXXPLTLPPP 805
           P PR   P    PP   P  RR    PSP + P   P     A  P   PL  PPP
Sbjct: 5   PPPRRAPPPPATPP---PPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPP 57


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 28/105 (26%), Positives = 29/105 (27%), Gaps = 1/105 (0%)
 Frame = +2

Query: 494 PXXSXSSXGXPAXAAAAXHXXAXTXXXPGXXLXXGXXXPPXRXASX*XPXPRXXXPLXXG 673
           P  S  +   PA  A      A     P          PP        P P    P    
Sbjct: 45  PAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPPTPKKA--PPPPVTPPPVTP 102

Query: 674 PPXXXPSXRRXXLXPSPALXPXXXPXXXWXAXXP-XXXPLTLPPP 805
           PP   P        P PAL P   P     A  P    P T PPP
Sbjct: 103 PPVTPPPVSPPPATPPPALPPSTPPPVAAPAEAPAALPPATTPPP 147


>09_04_0180 + 15367737-15367755,15368874-15369739
          Length = 294

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/66 (28%), Positives = 20/66 (30%)
 Frame = +2

Query: 608 PPXRXASX*XPXPRXXXPLXXGPPXXXPSXRRXXLXPSPALXPXXXPXXXWXAXXPXXXP 787
           PP R      P PR   P     P   P      L P P   P   P        P   P
Sbjct: 132 PPPRPMPIPTPSPRPRPPDPEPKPDPEPDPE---LEPEPEPEPDPEPEPEPPTPKPIPTP 188

Query: 788 LTLPPP 805
           +  PPP
Sbjct: 189 IPSPPP 194


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,045,519
Number of Sequences: 37544
Number of extensions: 135580
Number of successful extensions: 418
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)