BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_K23
(811 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro... 30 4.3
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA... 30 4.3
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB... 30 4.3
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 29 7.5
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 29 7.5
>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
protein.
Length = 1458
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
H PHH H H+G+G Q E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690
>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
isoform A protein.
Length = 1458
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
H PHH H H+G+G Q E+L+++
Sbjct: 663 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 690
>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
isoform B protein.
Length = 1740
Score = 29.9 bits (64), Expect = 4.3
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 228 HAPHHALCSHDHSGSGVRSQVLERLEMR 311
H PHH H H+G+G Q E+L+++
Sbjct: 945 HHPHHHPLQHPHAGAGDPRQTQEQLQLQ 972
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 29.1 bits (62), Expect = 7.5
Identities = 28/123 (22%), Positives = 31/123 (25%), Gaps = 1/123 (0%)
Frame = +2
Query: 440 PPXXGPXXXLPXSRXXPPPXXSXSSXGXPAXAAAAXHXXAXTXXXPGXXLXXGXXXPPXR 619
PP P P S PPP + + P A P P
Sbjct: 262 PPRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAPVPEYGPPPPAPPAGPTYQPRPPAPPA 321
Query: 620 XASX*XPXPRXXXPLXXGP-PXXXPSXRRXXLXPSPALXPXXXPXXXWXAXXPXXXPLTL 796
A PR P P P P P+P P P A P P
Sbjct: 322 PAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTYQP-QPPAPPAPAPGPTYQPRPP 380
Query: 797 PPP 805
PP
Sbjct: 381 APP 383
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 29.1 bits (62), Expect = 7.5
Identities = 28/123 (22%), Positives = 31/123 (25%), Gaps = 1/123 (0%)
Frame = +2
Query: 440 PPXXGPXXXLPXSRXXPPPXXSXSSXGXPAXAAAAXHXXAXTXXXPGXXLXXGXXXPPXR 619
PP P P S PPP + + P A P P
Sbjct: 262 PPRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAPVPEYGPPPPAPPAGPTYQPRPPAPPA 321
Query: 620 XASX*XPXPRXXXPLXXGP-PXXXPSXRRXXLXPSPALXPXXXPXXXWXAXXPXXXPLTL 796
A PR P P P P P+P P P A P P
Sbjct: 322 PAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPTYQP-QPPAPPAPAPGPTYQPRPP 380
Query: 797 PPP 805
PP
Sbjct: 381 APP 383
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,771,291
Number of Sequences: 53049
Number of extensions: 201942
Number of successful extensions: 443
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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