Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_K22
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125061-1|BAC86037.1|  202|Homo sapiens protein ( Homo sapiens ...    31   4.2  
AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant pr...    31   5.5  

>AK125061-1|BAC86037.1|  202|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43071 fis, clone BRTHA3009291. ).
          Length = 202

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +2

Query: 569 PRXPLXGXLXXXXXXRLXXXXFXSPPXXXLPXXXAXVLSXPXRPXXTXXPPPXPFPSXSG 748
           P  PL   L       L      SPP   LP   +  L  P +      PPP P P+   
Sbjct: 54  PYSPLPPPLQPSTTLLLHPSSSSSPPPSPLPLQLSTTLLLPLQFSFLCSPPPPPLPALLP 113

Query: 749 XXCXXP 766
             C  P
Sbjct: 114 LPCNTP 119


>AB209373-1|BAD92610.1|  410|Homo sapiens CS0DA006YC23 variant
           protein.
          Length = 410

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 17/64 (26%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
 Frame = +3

Query: 372 PXXXAPXXXPAXPXXXXXXAVPLPXXXXPXPPPXFXP-YXXXXPXXXXXLXXRPXXAPXX 548
           P    P   P  P      A+P P    P PPP + P +    P         P   P  
Sbjct: 309 PPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGL 368

Query: 549 AXPP 560
             PP
Sbjct: 369 GLPP 372


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,231,889
Number of Sequences: 237096
Number of extensions: 626184
Number of successful extensions: 2301
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2171
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)