Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_T7_K08
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    31   0.97 
02_03_0388 + 18429538-18430598,18430971-18431081,18431165-184312...    30   3.0  
12_02_1174 - 26696869-26698191                                         29   3.9  
09_04_0506 - 18188785-18190599                                         29   3.9  
07_03_1160 - 24430240-24431268                                         29   3.9  
06_01_0486 - 3455030-3455770                                           29   3.9  
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    29   3.9  
04_03_1022 - 21778315-21779007                                         29   5.2  
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535...    29   6.9  

>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 17/50 (34%), Positives = 20/50 (40%)
 Frame = +3

Query: 654 PXQXPPXTXXRLXPXPXXXPPPLPXXPPXXSSLSLRXRXXXXPTXGPXXP 803
           P   PP    R+ P P   PP LP  PP  +S+S        P   P  P
Sbjct: 77  PAPRPPRRHHRIPPPP---PPLLPTPPPPPASISPTPAPPLPPPPAPAPP 123


>02_03_0388 +
           18429538-18430598,18430971-18431081,18431165-18431237,
           18431513-18431695
          Length = 475

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = +2

Query: 377 AXRRP-PXXPXAXXXSXXPTXP*XPXPXXPXXGAXRPPXWDXPXPSXXXPRXPRXXP 544
           A R P P  P +   +  P+ P  P P  P   A  PP    P P    P+ PR  P
Sbjct: 71  ASRAPSPPAPPSPPQASAPSPPHAPAPSPPQAPAMTPPQAPAPTP----PQAPRPAP 123


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/50 (28%), Positives = 18/50 (36%)
 Frame = +3

Query: 654 PXQXPPXTXXRLXPXPXXXPPPLPXXPPXXSSLSLRXRXXXXPTXGPXXP 803
           P    P     L P P   PPP P  PP      ++ +    P+  P  P
Sbjct: 141 PPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSP 190


>09_04_0506 - 18188785-18190599
          Length = 604

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
 Frame = +3

Query: 645 SXXPXQXPPXTXXRLXPXPXXX-PPPLPXXPPXXSSLSLRXRXXXXPTXGPXXP 803
           S  P Q PP    +  P P    PPPL   PP       + +    P+  P  P
Sbjct: 48  SHPPPQPPPPPQQQQQPPPISQQPPPLQAPPPPPQQQQQQQQLQAPPSLPPPPP 101


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/47 (27%), Positives = 17/47 (36%)
 Frame = +3

Query: 666 PPXTXXRLXPXPXXXPPPLPXXPPXXSSLSLRXRXXXXPTXGPXXPD 806
           PP     + P P   P P+P  PP    L +        +  P  PD
Sbjct: 167 PPLPNPNVPPKPDQPPQPIPNGPPKPDMLPMPKPDGSPNSYAPSVPD 213


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 18/60 (30%), Positives = 19/60 (31%)
 Frame = +2

Query: 389 PPXXPXAXXXSXXPTXP*XPXPXXPXXGAXRPPXWDXPXPSXXXPRXPRXXPXANXLXPL 568
           PP  P        PT P  P P  P      PP    P P    P  P   P A    P+
Sbjct: 106 PPTPPYVPPYIPPPTPPYVPPPTPPSP----PPYVPPPTPPSPPPYVPPPSPPATKTCPI 161


>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +3

Query: 654 PXQXPPXTXXRLXPXPXXXPPPLPXXPPXXSS 749
           P   PP       P P   PPP+P  PP   S
Sbjct: 434 PEHPPPPESTSPPPPPTSDPPPVPPPPPTTGS 465


>04_03_1022 - 21778315-21779007
          Length = 230

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +3

Query: 666 PPXTXXRLXPXPXXXPPPLPXXPP 737
           PP +   L P P   PPP P  PP
Sbjct: 27  PPCSSAHLLPPPPPPPPPPPYVPP 50


>06_03_0310 -
           19453047-19453160,19453240-19453338,19453441-19453513,
           19453598-19453708,19453795-19453956,19454064-19454340,
           19454542-19455160,19455256-19455471
          Length = 556

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
 Frame = +2

Query: 377 AXRRP-PXXPXAXXXSXXPTXP*XPXPXXPXXGAXRPPXWDXPXPSXXXPRXPRXXP 544
           A R P P  P +      P+ P  P P  P   A  PP    P P    PR P   P
Sbjct: 147 ASRAPSPPAPPSPPQDPAPSLPHAPAPPPPQAPAPTPPQAPAPTP----PRAPTPTP 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,033,319
Number of Sequences: 37544
Number of extensions: 180961
Number of successful extensions: 1375
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)