Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_J24
(782 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 331 8e-92
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 327 1e-90
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 138 8e-34
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 75 1e-14
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 36 0.005
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 32 0.11
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 32 0.11
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.19
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.25
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.33
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.33
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.57
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.99
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.3
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 28 1.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 2.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.0
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 4.0
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 26 7.0
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 25 9.3
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 25 9.3
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 331 bits (813), Expect = 8e-92
Identities = 151/203 (74%), Positives = 175/203 (86%), Gaps = 1/203 (0%)
Frame = -1
Query: 755 SSITASWK-STAL*M*PHRVPD*LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNAC 579
SSITAS + + +L + + LVPYPRIHFPLVTY+P++SA KA+HE SV EITN C
Sbjct: 240 SSITASLRFAGSLNVDLNEFQTNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQC 299
Query: 578 FEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGI 399
FEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQFVDWCPTGFK+GI
Sbjct: 300 FEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGI 359
Query: 398 NYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE 219
Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEE
Sbjct: 360 CYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEE 419
Query: 218 GEFSEAREDLAALEKDYEEVGMD 150
GEFSEAREDLAALE+DYEEVG D
Sbjct: 420 GEFSEAREDLAALERDYEEVGQD 442
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 327 bits (803), Expect = 1e-90
Identities = 144/180 (80%), Positives = 161/180 (89%)
Frame = -1
Query: 689 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 510
LVPYPRIHFPLVTYAP++SA KA+HE SV EITN CFEP NQMVKCDPR G+YMA C+L
Sbjct: 259 LVPYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLL 318
Query: 509 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 330
YRGDV+P+DV AA+ TIK KRTIQFVDWCPTGFK+GI +PP + G ++AKV RAVCML
Sbjct: 319 YRGDVIPRDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCML 378
Query: 329 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 150
SNTT+IAEAW+RLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 379 SNTTSIAEAWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 438
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 138 bits (334), Expect = 8e-34
Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Frame = -1
Query: 689 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 510
+VP+PR+HF +V +AP+ + + + +SV E+T F+ N MV DPRHG+Y+ L
Sbjct: 257 MVPFPRLHFFMVGFAPLAAIGSSSFQAVSVPELTQQMFDANNMMVAADPRHGRYLTVAAL 316
Query: 509 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 330
+RG V K+V+ I +++TK + FV+W P + PP DL + + +
Sbjct: 317 FRGKVSMKEVDEQIRSVQTKNSAYFVEWIPDNVLKAVCSVPPK-----DL---KMSATFI 368
Query: 329 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEV 159
N+T+I E + RL +F M+ ++AF+HWY GEGM+E EF+EA DL + + Y+E
Sbjct: 369 GNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
Query: 158 GMD 150
G+D
Sbjct: 429 GID 431
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 74.9 bits (176), Expect = 1e-14
Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Frame = -1
Query: 689 LVPYPRIHFPLVTYAPVISA---EKAYHEQLSVAEITNACFEPANQMVKCDP-RHGKYMA 522
L+P PR HF L +Y P + E + +V ++ P NQMV +P + +++
Sbjct: 260 LIPSPRCHFLLTSYTPFTNQQVEEAKAIRKTTVLDVMRRLLLPKNQMVSVNPSKKSCFIS 319
Query: 521 CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRA 342
+ +G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ +
Sbjct: 320 ILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL--- 376
Query: 341 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKD 171
ML+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L +
Sbjct: 377 --MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADLINE 434
Query: 170 YE 165
YE
Sbjct: 435 YE 436
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 41.5 bits (93), Expect = 1e-04
Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = -2
Query: 676 PVSTSHWSRTRQSSLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVT 497
P STS S + NS PLP + T ++ +IP ++ V TV
Sbjct: 253 PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS-----TSIPPTGNSTTPVTPTVPP 307
Query: 496 SYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVST-TSHPPWCPEATWPRFNVP---SACC 329
+ + P P+ S SS+ + S S +T TS PP T VP ++
Sbjct: 308 TSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSST 367
Query: 328 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSKRITKKSAWT 149
TPPP T+SS + S SCT TS + +S PV +P + T
Sbjct: 368 STPPPPASTSSTGTSSSPLLSTST-SCT-TSTSIPPTGNSTTPVTPTVPPTSSSTPLTTT 425
Query: 148 PLKARVREPKSTKPV 104
P ++ PV
Sbjct: 426 NCTTSTSVPYTSTPV 440
Score = 33.5 bits (73), Expect = 0.035
Identities = 48/163 (29%), Positives = 65/163 (39%), Gaps = 15/163 (9%)
Frame = -2
Query: 679 TPVSTSHWSRTRQSSLPRRPTMNSFPLPRSQTHASS----PPTRW*NAIPVMASTWLAVC 512
TP+ T S T +S +S PLP + T ++ PPT +++ + +
Sbjct: 85 TPIITESTSSTSSASTTGS---SSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPT 141
Query: 511 CTVVTSYPRM*TRPSLP---SKP----SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPR 353
T TS P T S S P S +ST + P S S ++ P P T P
Sbjct: 142 STSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLST--PITP--TVPP 197
Query: 352 FNVPSACCPTPPPSLKL----GLALTTSSTSCTPSVLSCTGTS 236
+ S P PP S L T+STSCT S TG S
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGS 240
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 36.3 bits (80), Expect = 0.005
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = -2
Query: 493 YPRM*TRPSLP----SKPSVLSN-SSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 329
YP P+LP SKP V+ N V P +R + P+ ++P P+ C
Sbjct: 166 YPVSLPSPNLPHQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPPPLCPATYC 224
Query: 328 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPSKRITKKSA 155
P+ PP L A+ SS S ++ + T + + P + WLP + T
Sbjct: 225 PSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPT---- 280
Query: 154 WTPLKARVREPKS 116
+ P A V +P S
Sbjct: 281 FQPPSANVYQPAS 293
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -2
Query: 343 PSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--KRI 170
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 169 TKKSAWTPLKARVREPKSTK 110
S+ TP+ V EP+ TK
Sbjct: 194 LGTSSKTPVYVVVDEPRFTK 213
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.9 bits (69), Expect = 0.11
Identities = 36/139 (25%), Positives = 56/139 (40%)
Frame = -2
Query: 622 PTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVL 443
PT S P PR T S+ R PV+ + A + + P+ SKP+ +
Sbjct: 964 PTSKSKPFPRLATGGSTAAAR--GPRPVVQNKPAAT---------KPVSMPAAKSKPAPM 1012
Query: 442 SNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTP 263
+N PVS + T + PP A R N A P + + A T S++ P
Sbjct: 1013 AN------PVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVSASKPAP 1064
Query: 262 SVLSCTGTSVRVWRRESSP 206
S ++ +S + S+P
Sbjct: 1065 STVTSAASSPSNISKPSAP 1083
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.19
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -2
Query: 451 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTS 272
S+L +S+ P+S + STT+ T ++ TP S+ + T +STS
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS 339
Query: 271 CTP--SVLSCTGTS 236
TP SV S T TS
Sbjct: 340 STPLSSVNSTTATS 353
Score = 30.3 bits (65), Expect = 0.33
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 2/151 (1%)
Frame = -2
Query: 679 TPVSTSH--WSRTRQSSLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCT 506
TP+++S+ + T S+ N+ L S T +S+P + + AS+
Sbjct: 253 TPLTSSNSTTAATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVN 312
Query: 505 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCP 326
T+ T S S + + +ST P+S STT+ T ++
Sbjct: 313 STTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASS 372
Query: 325 TPPPSLKLGLALTTSSTSCTPSVLSCTGTSV 233
TP S+ A + SST T S S T TSV
Sbjct: 373 TPLTSVNSTSATSASSTPLT-SANSTTSTSV 402
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 505 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 371
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
Score = 27.1 bits (57), Expect = 3.0
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Frame = -2
Query: 634 LPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMA---STWLAVCCTVVTSYPRM*TRPSL 464
+P P++ P+ S P R A+PV+ S VV P + RP++
Sbjct: 598 VPEAPSVPQPPVAPVAPEVPSVPQR--PAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAV 655
Query: 463 PSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 371
P P S PV V + PP P
Sbjct: 656 PVVPEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 25.4 bits (53), Expect = 9.3
Identities = 23/90 (25%), Positives = 32/90 (35%)
Frame = -2
Query: 637 SLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLPS 458
S+P+RP + P S P +P + +A S P+ P P
Sbjct: 558 SVPQRPAVPVVPEALSVPQPPVAPVA--PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPE 615
Query: 457 KPSVLSNSSTGVQPVSRSVSTTSHPPWCPE 368
PSV + V P + SV P PE
Sbjct: 616 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 0.33
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 451 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 275
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 274 SCTPSVLS 251
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 0.33
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 451 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 275
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 274 SCTPSVLS 251
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.57
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 463 PSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLG 299
P+ P + S P + S TS PP + P + P + P+ PPSL +G
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMG 442
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -2
Query: 469 SLPSKPSVLSNSSTGVQPVSRSVSTT-SHPPWCPEATWPRFNVPSACCPTPPPSLKLGLA 293
S P+ P + + S T PV S S PP P + P + + P PPS +
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 292 LTTSSTSCTP 263
L + P
Sbjct: 459 LPAGMPAAPP 468
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -2
Query: 400 STTSHPPWCPE--ATWPRFNVPSACCPTPPP 314
++TS PP P ++ P VPS P PPP
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPP 255
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 0.99
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -2
Query: 499 TSYPRM*TRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 329
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 328 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 197
P P P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 593 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 468
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 28.3 bits (60), Expect = 1.3
Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 2/157 (1%)
Frame = -2
Query: 643 QSSLPRRPTMNSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSL 464
++ L R P+ + PL H S PP IP + +T ++ P + RPSL
Sbjct: 350 RAPLQRTPSGSLTPLSSRPAHTSLPP------IPTVQTT--------SSNVPPV-NRPSL 394
Query: 463 PSK-PSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTP-PPSLKLGLAL 290
SK PSV + S + P+S S + P++ P SA TP PSL+
Sbjct: 395 KSKSPSVSNILSNQLSPIS-SANNDVMARLQPKSPIPATKSYSATIQTPRSPSLR----- 448
Query: 289 TTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS 179
STS V TSV+ + +S V + PS
Sbjct: 449 RADSTSHIIKVPHLPDTSVKTAKTGASEIDVLSRYPS 485
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +3
Query: 465 SDGRVHILGYDVTTVQHTASHVLAMTGIAFHHLVGGLEACVCDLGNGKLFMVGLLGRDDW 644
S G +LGY ++ A++V+A + + HL+ G D K G D
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK-------GLDML 459
Query: 645 RVRDQWEVDTGVR 683
R Q+E++ G++
Sbjct: 460 VDRVQYELEAGLQ 472
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 460 SKPSVLSNSSTGVQP--VSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 314
S P+ S++GV VS S S PP P A P ++PS P PPP
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 409 RSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLS 251
++ S T+ P P ++ FN PSA P P++ + +T TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT--TPSATS 503
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 469 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 383
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 651 RDQWEVDTGVRHXLVWN 701
RDQW V T + +VWN
Sbjct: 289 RDQWVVSTSSQKTIVWN 305
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 25.4 bits (53), Expect = 9.3
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Frame = -2
Query: 502 VTSYPRM*TRPSLP--SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 329
+T+ R T+P+ P S+ +N + S S+ S P +A +VP +
Sbjct: 498 LTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPSAFTKAGNEALSVPLSGA 557
Query: 328 PTPPPSLKLGLALTTSSTSCTPSVLSCTGT 239
S LA SS S +L C GT
Sbjct: 558 RNTAASRPTNLAAGNSSASIVQQLLECGGT 587
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 472 PSLPSKPSVLSNSST--GVQPVSRSVSTTSHPPW 377
P PS+P+++SN ST G+Q V V + W
Sbjct: 531 PISPSRPALISNISTKKGIQVVGNMVYDPTRLRW 564
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,111,995
Number of Sequences: 5004
Number of extensions: 70597
Number of successful extensions: 296
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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