Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_J16
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 176 2e-44
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 176 2e-44
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 176 2e-44
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 176 2e-44
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 176 2e-44
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 176 2e-44
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 176 2e-44
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 176 2e-44
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 2.8
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical ... 28 8.7
AC024762-5|AAF59478.2| 335|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 298 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 354
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 783 KQXQKKAHIMEIQXXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQG 622
++ QKKAH++EIQ GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 298 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 354
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 783 KQXQKKAHIMEIQXXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQG 622
++ QKKAH++EIQ GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 200 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 256
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 783 KQXQKKAHIMEIQXXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQG 622
++ QKKAH++EIQ GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G
Sbjct: 74 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 126 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 185
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 186 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 250 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 306
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 236 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 298 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 354
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 783 KQXQKKAHIMEIQXXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQG 622
++ QKKAH++EIQ GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 200 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 256
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 257 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 301
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 783 KQXQKKAHIMEIQXXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQG 622
++ QKKAH++EIQ GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G
Sbjct: 74 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 127
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 126 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 185
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 186 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 250 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 306
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 307 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 351
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 176 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 235
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 236 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 176 bits (428), Expect = 2e-44
Identities = 94/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 583 RSYPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKRMAK 404
+ PRKTHKGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ K
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 403 LLKTMHLLSMICLRNPLHRWEVSPIMVK*TTTL**XKGCCMGPKKRIITLRKSLRVHTKR 224
+ P+ + I+ + L +G +GPKKR+ITLRKSL TKR
Sbjct: 298 NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIML---RGAVLGPKKRLITLRKSLITQTKR 354
Query: 223 AALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLKKDRIREEAA 89
A EKINLK+IDTSSK GHGRFQT A+K AFMG LK+D + E A
Sbjct: 355 VAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAEAEA 399
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/54 (70%), Positives = 45/54 (83%)
Frame = -1
Query: 783 KQXQKKAHIMEIQXXRGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTQG 622
++ QKKAH++EIQ GTIE KV WAREHLEK + VD+VFAQDEMID IGVT+G
Sbjct: 172 RRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRG 225
Score = 74.1 bits (174), Expect = 1e-13
Identities = 49/120 (40%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = -2
Query: 626 KGKGYKGVTSRWHTKKLPP*DTQGS*E-SCL---HWSLASF*GVVHCSSCWSERLSSPY* 459
+G G+KGVTSRWHTKKLP +G + +C+ H S +F + R
Sbjct: 224 RGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNK 283
Query: 458 NEQENLSYWTRNPQKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 279
+ S T ++GK NN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 284 IYRIGKSALT----EEGK---NNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyclase
protein 21 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 210 FSSAALFVCTRRDFLRVMIRFLGPMQQPLXHHKVVVYFTIM 332
FS LF+ + FL+++IR+L + P+ +H VV T M
Sbjct: 1049 FSLNKLFIV--KSFLKLLIRYLQMRRHPISNHNVVTVKTCM 1087
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 158 ESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSRCLLHH 328
++T LG G+ +EF +D F C +RLSK++ LFR + + C H
Sbjct: 288 QATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLESCTFEH 347
>AF038615-7|AAB94147.1| 479|Caenorhabditis elegans Hypothetical
protein R02D3.7 protein.
Length = 479
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -1
Query: 153 RRLTRLHSWVHS--RRIVFA----KKLRLPQPQRGCCAALSVVRENKHLTMQKK 10
R +T++H+W + ++ A KK R CC + R KHL KK
Sbjct: 32 RHMTQIHNWTTEDCQELIAAIKSEKKSRASSTSFVCCHCRMIFRSVKHLVQHKK 85
>AC024762-5|AAF59478.2| 335|Caenorhabditis elegans Hypothetical
protein Y38F2AL.1 protein.
Length = 335
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 367 DRSYSVDALFLITLPSFCGFLVQYDRFSCSFQYGDDN 477
D ++ + +T P C + YD++S +F+ DDN
Sbjct: 110 DGNHILQRYATVTEPLHCVYKFDYDKYSGTFELEDDN 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,542,249
Number of Sequences: 27780
Number of extensions: 442534
Number of successful extensions: 1187
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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