Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_J09
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 38 0.002
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.062
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.11
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 30 0.33
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 29 0.57
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.57
SPBC354.05c |sre2||membrane-tethered transcription factor |Schiz... 28 1.3
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 28 1.3
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 27 2.3
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 2.3
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 2.3
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 2.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 27 3.1
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 27 3.1
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 27 3.1
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 27 3.1
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 27 3.1
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 27 4.0
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 4.0
SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 27 4.0
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 27 4.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 26 5.4
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 5.4
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 9.4
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 37.5 bits (83), Expect = 0.002
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = -3
Query: 427 IEMSQTNDKKGISENGRAEESGLVHQDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANP 248
IE ++ N+K + S +V + P++APS SN + +K S SK +
Sbjct: 333 IEQNRENEKSSTKNDSTVSSSAVVMAPAGPAMAPSASNKPSASSTTKSSNSKSKKKVTSI 392
Query: 247 STSSFSRH--GSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAFETPNEFASQFS 74
S +SF ++ S + S S P+ T+ +S+ G L E + S S
Sbjct: 393 SGTSFFKNLASSTKPTSASSSTKAPLTKQQTNPSTPLSSIMAG--LKGREKEKDKDSGIS 450
Query: 73 LKSVAESVTE 44
++V+ + E
Sbjct: 451 SENVSNNREE 460
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 32.7 bits (71), Expect = 0.062
Identities = 26/94 (27%), Positives = 38/94 (40%)
Frame = -3
Query: 364 GLVHQDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNA 185
G+ S S + S + S S S TP ++ TSS S S S S++
Sbjct: 132 GIYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSS 191
Query: 184 GPIRNYSTSSLAYISTPFHGSTLSAFETPNEFAS 83
G I + +++ S ST+S F T AS
Sbjct: 192 GSISSADAKTVSASS----NSTISGFSTSTTSAS 221
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.11
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = -3
Query: 337 SIAPSQSNNQLKPNMSKRKLSYSKTPKANPST-SSFSRHGSQETFSRRQSNAGPIRNYST 161
S +PS S++ + S S T ++ ST SS S S T S S++ I + S+
Sbjct: 219 SSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSS 278
Query: 160 SSLAYISTPFH-GSTLSAFETPNEFASQFSLKSVAES 53
SS + ST S+ S+ +P +S S S + S
Sbjct: 279 SSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSS 315
Score = 31.9 bits (69), Expect = 0.11
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Frame = -3
Query: 346 SVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAGPIRNY 167
S S +PS S+ + SK S+S T ++ STSS + S + SR S++ +
Sbjct: 344 SSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSL 403
Query: 166 ST--------SSLAYISTPF-HGSTLSAFETPNEFASQFSLKS 65
S+ SS A +S+ F H ST S + + S SL S
Sbjct: 404 SSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSS 446
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 30.3 bits (65), Expect = 0.33
Identities = 32/100 (32%), Positives = 42/100 (42%)
Frame = -3
Query: 337 SIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTS 158
S+A S N+ + +S S + P TSS S + S S+A Y+TS
Sbjct: 226 SLASSSLNSTTSATATSSSIS-STVSSSTPLTSSNSTTAATSA-SATSSSA----QYNTS 279
Query: 157 SLAYISTPFHGSTLSAFETPNEFASQFSLKSVAESVTEAA 38
SL STP SA T AS L SV + T +A
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSA 319
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 29.5 bits (63), Expect = 0.57
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 739 FPATVXIVTSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLETYGYKGAVLILGGIM-- 566
+P + I+ + + F + +CM +GS + P + L E +G +++LG +
Sbjct: 33 WPIRIRIINTIIISFMTM---LCM----YGSSVFMPSIPELCEKFGEPETLVVLGATLYV 85
Query: 565 LNVWAAALLFQPVEE 521
+ V L+F P+ E
Sbjct: 86 IGVMLGPLIFSPLSE 100
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.5 bits (63), Expect = 0.57
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = -3
Query: 355 HQDSVPSIAPS-QSNNQLKPNMSKRKLSYSKTPKANP-STSSFSRHGSQETFSRRQSNAG 182
+ + +P+ + S ++ + P LS TP P STSS S + S +N+
Sbjct: 161 NSNPLPTTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSS 220
Query: 181 PIRNYSTSSLAYISTPFHGSTLSAFETP 98
P+ STS S P GS S+ TP
Sbjct: 221 PLPTTSTSCTTSTSIPTGGS--SSLSTP 246
Score = 29.1 bits (62), Expect = 0.76
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -3
Query: 343 VPSIAPS-QSNNQLKPNMSKRKLSYSKTPKANP-STSSFSRHGSQETFSRRQSNAGPIRN 170
+PS + S ++ + P LS TP P STSS S + S +N+ P+
Sbjct: 108 LPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Query: 169 YSTSSLAYISTPFHGSTLSAFETP 98
STS S P G + S+ TP
Sbjct: 168 TSTSCTTSTSIPPTGGS-SSLSTP 190
Score = 26.6 bits (56), Expect = 4.0
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -3
Query: 343 VPSIAPSQSNNQLKPNMSKRKLSYSKTPKANP-STSSFSRHGSQETFSRRQSNAGPIRNY 167
+P+ + S + + P LS TP P STSS S + S +N+ P+
Sbjct: 222 LPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTT 281
Query: 166 STSSLAYISTPFHGST 119
STS S P G++
Sbjct: 282 STSCTTSTSIPPTGNS 297
>SPBC354.05c |sre2||membrane-tethered transcription factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 793
Score = 28.3 bits (60), Expect = 1.3
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Frame = -3
Query: 340 PSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAG---PIRN 170
PSI+P N K L+ ++PK N + + + S S + +N G P++
Sbjct: 244 PSISPHSLNPNFPQYTEKPALTLLQSPKQNSNYDTSNFQNSVSDSSMQFTNEGMPSPVKG 303
Query: 169 YSTSSLAYISTPFHGSTL---SAFETPNEFASQFSLKSVAES 53
+S A ST+ +A E NEF + LK S
Sbjct: 304 IMSSDDAVAFNFSQYSTVYPQNAPENGNEFETPNKLKRTVSS 345
>SPBC3F6.05 |rga1||GTPase activating protein
Rga1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1150
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -3
Query: 349 DSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRH-GSQETFSRRQSNAGPIR 173
D +P + Q N + +PN + SY+ S + + ++ G+Q+ + + +A PIR
Sbjct: 708 DDIPKVISEQRNREHRPNAFRHMPSYTDPSYRKNSGAIYDKNDGTQKGLTPKSEDA-PIR 766
Query: 172 NYSTSS 155
S S
Sbjct: 767 YLSDLS 772
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -3
Query: 379 RAEESGLVHQDSVPSIAPSQSNNQLKP----NMSKRKLSYSKTPKANPSTSSFSRHGSQE 212
R + +++ S+ S A S+S +L P ++ L S TP +SSF +E
Sbjct: 378 RGPSATSLNKFSMISDAASKSRAKLPPLTSGSLKLNTLDISNTPNLRRFSSSFGPRERKE 437
Query: 211 TFSRRQSNAGPIRNYSTSSL 152
+FS R N P+ N+ S+
Sbjct: 438 SFSSR--NRLPLVNHPIRSI 455
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 27.5 bits (58), Expect = 2.3
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Frame = -3
Query: 343 VPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAGPI---- 176
VP I P + + + + S+TP + +S + + S QSN GP+
Sbjct: 451 VPLIPPLKCDPNAFSASTPASGAVSRTPSSVSLSSLSNVNSSMPHKPASQSNVGPVRISS 510
Query: 175 ----RNYSTSSLAYISTPFHGSTLSAFETPNEFASQFSLKSVAESV 50
R +S+SS +S GS S + +S +S + A S+
Sbjct: 511 NRRSRKFSSSSRVSVSNLLAGSPPSPSSSTKSASSSYSTTTPAFSI 556
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.5 bits (58), Expect = 2.3
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -3
Query: 259 KANPSTSSFSRHGSQE--TFSRRQS--NAGPIRNYSTSSLAYISTPFHG 125
K N S S + R S++ T SR S N G +RN ST A + PF G
Sbjct: 272 KVNASASLYDRSPSKKDITSSRNTSSYNLGSMRNPSTLKNAAHANPFEG 320
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = -3
Query: 367 SGLVHQDS-VPSIAPSQSNNQLKPNMSKRKLSYSKTP--KANPSTSSFSRHGSQETFSRR 197
SGL S +PS S+SN++ S K S S T ++NP + S + T S+
Sbjct: 991 SGLTSSSSTIPSSTRSESNSESASTSSASKRSSSSTSLVQSNPVKTVVSLESYKFTTSKI 1050
Query: 196 QSNAGPIRNYSTSSL 152
P + Y+ + +
Sbjct: 1051 SLVKNPTKTYTVTDV 1065
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.1 bits (57), Expect = 3.1
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Frame = -3
Query: 430 VIEMSQTNDKKGISENGRAEESGLVHQDSVPSIAPSQSNNQLK-PNMSKRKLSYSKTPKA 254
V ++ T+ + S + S LV V S + S + K ++S +LS A
Sbjct: 465 VYSVTPTSAENYTSSEAFSTSSSLVVIPPVNSSLVTSSTSFTKFSSLSSSQLSTENFTSA 524
Query: 253 NPSTSSFSRHGSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAFET 101
+ S S + S T S + + TSS IS+P S+L+A T
Sbjct: 525 SSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATST 575
Score = 26.6 bits (56), Expect = 4.0
Identities = 25/101 (24%), Positives = 48/101 (47%)
Frame = -3
Query: 337 SIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTS 158
S+ S + + +S +S S TP +PS S S+ S ++ ++ P + S++
Sbjct: 142 SVINSPTGTAVSSQISTLSMSPSSTPVFSPSASVSSKVASSVSY----VSSEPSDSSSST 197
Query: 157 SLAYISTPFHGSTLSAFETPNEFASQFSLKSVAESVTEAAY 35
+ ++T + +S+ ET L SV+ + TE+AY
Sbjct: 198 NTVILTTSVNSPAVSSSET---------LTSVSITSTESAY 229
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = -2
Query: 299 EYVQTEVVVLENAQSESEHVLVQQTRLAGNLQQEAEQ-RRTDQE---LFDVQLS 150
E +Q+ + +EN ++E+++ + L NL+ E+ + R D+E L D QLS
Sbjct: 431 EQIQSSIKDMENVFRKNEYLMEELNELKNNLEVESSKVLRLDEEMKCLKDEQLS 484
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 27.1 bits (57), Expect = 3.1
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = -3
Query: 337 SIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTS 158
S S ++NQ + + +Y K + STS FS QE R+ + +R S S
Sbjct: 46 STRSSPASNQQNLEIVSQSEAYHKISDLDDSTSIFS-ISDQENILERRISEEVVRENSVS 104
Query: 157 SLAYIST 137
S+ +S+
Sbjct: 105 SIENVSS 111
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 243 VLGFALGVFEYDNFRLDIFGFSWLFDWDGAMLGTLSWWTSPLSSALPFSDMPFLSFV 413
V+ A+GV Y N +L W+F W G W + ++ LP+ P + +
Sbjct: 81 VIPLAVGVSPYPNAKLGGVRIFWIFVWLEVAWGGF-WVSRVIARLLPYILYPLMGIL 136
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = -3
Query: 736 PATVXIV-TSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLETYGYKGAVLILGGIMLN 560
PA IV SY VR+R + S + F + ++ ++ + G+K + N
Sbjct: 355 PAAYVIVGESYPVRYRSKCAAVATSANWFWNFLISFFTPFITNSIGFKYGYIFAS---CN 411
Query: 559 VWAAALLFQPVEEHMVRKYKE 497
+ AA++F V E R +E
Sbjct: 412 LTGAAIIFLFVHETKGRTLEE 432
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 26.6 bits (56), Expect = 4.0
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -3
Query: 325 SQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAG---PIRNYSTSS 155
SQ+N + S+ +S+++ + + T G+++ F R ++ P N+S S+
Sbjct: 191 SQTNLSDETEGSESSVSFNRLSRNHSPTRPLL--GNRDLFRRSSNHVSASMPTANHSESA 248
Query: 154 LAYISTPFHGSTLSAFETPNEFASQFS 74
+ TP ST F+ PN S S
Sbjct: 249 YRHSKTPLGDST---FQAPNNGGSLHS 272
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 195 CLLLKVSCEPCLLNEDVLGFALGVFEYDNF 284
C L K++ +NE V+GF+ + E DN+
Sbjct: 807 CKLGKLNLSETSINERVMGFSTNINETDNY 836
>SPAC11E3.13c |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 26.6 bits (56), Expect = 4.0
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = -3
Query: 385 NGRAEESGLVHQDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETF 206
N + + + ++ S P + + N+ + +S S T ++ +SS S S +
Sbjct: 387 NAPSNQEFSANATALVSPGPHSVSTTINTNIVQATISQSSTSGSSSGSSSASTTASSSSV 446
Query: 205 SRRQSNAGPIRNYSTSSLAYISTPFHGS-TLSAFETPNEFASQFSL 71
S S + + STS + + H S + S + AS F+L
Sbjct: 447 SSGSSISSGSSSMSTSYTSASGSSAHSSGSSSGSSSATSSASTFNL 492
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 26.6 bits (56), Expect = 4.0
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Frame = -3
Query: 277 SYSKTPKANPSTSS----FSRHGSQETFSRRQSNAGPIRNYSTSSLAYI--STPFHGSTL 116
SYS + PSTS S H S T S + S++ R+ S+SS + ST GS+
Sbjct: 502 SYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGSSH 561
Query: 115 SAFETPNEFASQFSLKSVAE-SVTEAAY 35
+ T + S S + +VT AY
Sbjct: 562 TITSTSQSVHTSGSSTSTSSVAVTSTAY 589
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.0
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 271 SKTPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAFETPNE 92
S P A S+ S + S S S++ R STSS +T FH T+S+ + +
Sbjct: 771 SNLPSATASSQSQLTNSSTLATSLYLSSSSS-RTISTSSTNEYNTSFHAPTVSSTTSSSS 829
Query: 91 FASQFSLKSV-AESVT 47
S + K V + S+T
Sbjct: 830 TTSLAANKGVNSNSIT 845
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 5.4
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 376 AEESGLVHQDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRR 197
AE GL Q S ++ S++ N+ N K S + + + STS +RH +E R
Sbjct: 86 AEALGLP-QPSALALTSSKAANRSSTNTEKDSRSIAHSTSRSRSTSPANRHRRKEK-ERT 143
Query: 196 QSN 188
+SN
Sbjct: 144 RSN 146
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 394 ISENGRAEESGLVHQDSVPSIAPSQ--SNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHG 221
+S + + ESG H S + + + N+Q + + ++ L + +PK NP S S
Sbjct: 385 LSTDNKIPESGSDHPSSQDNSSKASLVENSQTQSSTPRKPLPTTTSPKVNPEPHSESISD 444
Query: 220 SQETFSRR 197
++ + R+
Sbjct: 445 TRPSTPRK 452
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 293 VQTEVVVLENAQSESEHVLVQQTRLAGNLQQEAEQRRTD 177
+ +E++ L+ ES LVQ+ R NLQ E+ + +
Sbjct: 715 ISSELIELQKDMKESYRQLVQELRSLYNLQHTHEESQKE 753
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,836,439
Number of Sequences: 5004
Number of extensions: 56010
Number of successful extensions: 247
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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