Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_T7_J09
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical ... 55 5e-08
U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical p... 48 8e-06
Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical p... 32 0.54
Z83245-11|CAB05840.2| 337|Caenorhabditis elegans Hypothetical p... 32 0.54
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 30 2.2
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 29 2.9
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 29 2.9
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical pr... 29 5.0
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 5.0
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 5.0
U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of p... 29 5.0
U28732-8|AAB04898.1| 92|Caenorhabditis elegans Hypothetical pr... 29 5.0
AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of... 29 5.0
AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of... 29 5.0
AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical ... 29 5.0
Z70750-4|CAA94739.2| 187|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical pr... 28 6.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.6
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 8.8
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 8.8
AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical... 28 8.8
>AF026202-6|AAB71245.2| 594|Caenorhabditis elegans Hypothetical
protein C10E2.6 protein.
Length = 594
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/95 (27%), Positives = 48/95 (50%)
Frame = -3
Query: 766 MVGTGXGXAFPATVXIVTSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLETYGYKGAV 587
++GTG G + + IVT YF R LA GI ++G+ G+++ P+ + + YG++
Sbjct: 123 IMGTGFGLMYCPAIVIVTMYFENKRSLATGIAVAGAGVGTVLFAPINAFFINNYGWRSVF 182
Query: 586 LILGGIMLNVWAAALLFQPVEEHMVRKYKENQEED 482
L I++ F P+E +V +E ++
Sbjct: 183 LAFLFILVLCALCGATFAPLEFALVPDEEEEVNDE 217
>U41105-12|AAA82406.1| 556|Caenorhabditis elegans Hypothetical
protein T02G5.12 protein.
Length = 556
Score = 48.0 bits (109), Expect = 8e-06
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = -3
Query: 766 MVGTGXGXAFPATVXIVTSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLETYGYK 596
++G G G + + IVT YF R LA GI ++G+ G+++ P+ +++ YG++
Sbjct: 120 IMGIGFGLVYCPAIVIVTMYFESKRSLATGIAVAGAGVGAVVFGPINTFIISNYGWR 176
>Z70206-2|CAA94126.2| 771|Caenorhabditis elegans Hypothetical
protein C49F8.2 protein.
Length = 771
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3
Query: 760 GTGXGXAFPATVXIVTSYFVRFRGLANGICMSGSAFGSIILPPVL 626
G G + A + IVT YF + RGLA +SG+ G++I P +L
Sbjct: 174 GVGMSFIYNAAIVIVTYYFEKRRGLATSFAVSGTGVGTVIYPILL 218
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 36.7 bits (81), Expect = 0.019
Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = -3
Query: 766 MVGTGXGXAFPATVXIVTSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLETYG--YKG 593
+ G G G + + I++ YF + R +A GI + GS G+ + + + + G +K
Sbjct: 140 IAGAGFGMMYLPAIVIISQYFAKKRSVATGIAVCGSGIGTTVFALLNDVVWDFVGGDWKQ 199
Query: 592 AVLILGGIMLNVWAAALLFQPVE 524
++ + ++ A +L +P++
Sbjct: 200 FLVYTAAVTISGLGACILLRPLK 222
>Z68215-3|CAA92452.3| 415|Caenorhabditis elegans Hypothetical
protein C53B4.3 protein.
Length = 415
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = -3
Query: 694 RGLANGICMSGSAFGSIILPPVLRYLLETYGYKGAVLILGGIMLNVWAAA-LLFQPVEEH 518
+G+ G S ++ P YLL+ YG++ L+ GI+ ++ A + ++ PV+E+
Sbjct: 350 QGIVLGTATSLNSLVRTFSPLFAGYLLQNYGFQSLTLL--GIVGSLLAISFMVVSPVDEN 407
Query: 517 MVRKYK 500
+++K+K
Sbjct: 408 LIKKHK 413
>Z93373-3|CAD54120.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 31.9 bits (69), Expect = 0.54
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = -3
Query: 373 EESGLVHQDSVPSIAPSQSNNQLKPNM-------SKRKLSYSKTPKANPSTSSFSR-HGS 218
++ G +H D V S + +N+Q K + S+RK + T + ST R GS
Sbjct: 167 KDGGGLHLDDV-STSHHHNNHQQKGSRNLKYSQSSRRKYEQATTTTSGSSTDDSDRGSGS 225
Query: 217 QETFSRRQSNAGPIRNYSTSSLAYIST 137
R +AGP YST+S +ST
Sbjct: 226 SSGSHHRSHSAGPHTTYSTTSNHAVST 252
>Z83245-12|CAD54180.1| 449|Caenorhabditis elegans Hypothetical
protein ZK131.11b protein.
Length = 449
Score = 31.9 bits (69), Expect = 0.54
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = -3
Query: 373 EESGLVHQDSVPSIAPSQSNNQLKPNM-------SKRKLSYSKTPKANPSTSSFSR-HGS 218
++ G +H D V S + +N+Q K + S+RK + T + ST R GS
Sbjct: 167 KDGGGLHLDDV-STSHHHNNHQQKGSRNLKYSQSSRRKYEQATTTTSGSSTDDSDRGSGS 225
Query: 217 QETFSRRQSNAGPIRNYSTSSLAYIST 137
R +AGP YST+S +ST
Sbjct: 226 SSGSHHRSHSAGPHTTYSTTSNHAVST 252
>Z83245-11|CAB05840.2| 337|Caenorhabditis elegans Hypothetical
protein ZK131.11a protein.
Length = 337
Score = 31.9 bits (69), Expect = 0.54
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = -3
Query: 373 EESGLVHQDSVPSIAPSQSNNQLKPNM-------SKRKLSYSKTPKANPSTSSFSR-HGS 218
++ G +H D V S + +N+Q K + S+RK + T + ST R GS
Sbjct: 55 KDGGGLHLDDV-STSHHHNNHQQKGSRNLKYSQSSRRKYEQATTTTSGSSTDDSDRGSGS 113
Query: 217 QETFSRRQSNAGPIRNYSTSSLAYIST 137
R +AGP YST+S +ST
Sbjct: 114 SSGSHHRSHSAGPHTTYSTTSNHAVST 140
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = -3
Query: 412 TNDKKGISENGRAEESGLVHQDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSF 233
T +G S +G + + L VPS + S + + + S S +P + +T
Sbjct: 1235 TGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEM 1294
Query: 232 SRHGSQET 209
+ HGS +T
Sbjct: 1295 TSHGSTQT 1302
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = -3
Query: 265 TPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAFETPNEFA 86
TP NPS S+ S S + +AG S S + + + ++ +A T E
Sbjct: 719 TPSPNPSQSTSSLESSTSGATTSSGSAGTTMT-SPSQSSSVGSSQGSTSPAASTTSGEMT 777
Query: 85 SQFSLKSVAESVTEAA 38
SQ S ++ SV+ +A
Sbjct: 778 SQGSTQTPGSSVSTSA 793
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 539 QESSRPNVQHYSTQYQDGAFVAVGLEQVPKHRGQDD 646
QE + P V+ +Y D +F+ ++QV KH DD
Sbjct: 103 QEGTLPFVELNGKEYYDSSFILRDIDQVIKHTSLDD 138
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -3
Query: 373 EESGLVHQDSVPSIAPSQSNNQLKPNMSK-RKLSYSKTPKANPSTSSFSRHGSQETFSRR 197
E++ + ++P IA ++S + L P R +SY T A+ ST S + S+
Sbjct: 2 EQASVPSYVNIPPIAKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQV 61
Query: 196 QSNAGPIR 173
+ PIR
Sbjct: 62 SRESPPIR 69
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -3
Query: 373 EESGLVHQDSVPSIAPSQSNNQLKPNMSK-RKLSYSKTPKANPSTSSFSRHGSQETFSRR 197
E++ + ++P IA ++S + L P R +SY T A+ ST S + S+
Sbjct: 2 EQASVPSYVNIPPIAKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQV 61
Query: 196 QSNAGPIR 173
+ PIR
Sbjct: 62 SRESPPIR 69
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 694 RGLANGICMSGSAFGSIILPPVLRYLLETYGY 599
R +A G+C +G GS++ P ++ L T+G+
Sbjct: 443 RSMARGVCNAGGRLGSVMAPMIV--YLRTFGF 472
>Z68297-2|CAA92594.3| 522|Caenorhabditis elegans Hypothetical
protein F11A10.3 protein.
Length = 522
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -3
Query: 370 ESGLVHQDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTS---SFSRHGSQETFSR 200
E+G+ ++ P + + +L+ K+K S +TP +PS S S S ++ S
Sbjct: 101 ENGITSREHSPDPSTFKKTAKLQTKKKKKKESPPETPPTSPSPSPSRSVSPSTTKSDISS 160
Query: 199 RQSNAGPIRNYSTSSLAYISTP 134
++ + + S + STP
Sbjct: 161 KKGRKAVVNSVSKVKIEKESTP 182
>Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical
protein K02C4.5 protein.
Length = 422
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = -3
Query: 376 AEESGLVHQDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRR 197
A++ L+ D+ P P ++ + P + S P +P T H S S+R
Sbjct: 318 AQKPKLIQPDTTP---PPKTEKDVTPTFISVECYQSTVPIPSPRTYY---HTSDIPSSQR 371
Query: 196 QSNAGPIRNYSTSSLAYIST 137
S++ NYSTSS + +++
Sbjct: 372 SSSSAYSSNYSTSSSSNVTS 391
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = -3
Query: 265 TPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAFETPNEFA 86
TP NPS S+ S S + +AG S S + + + ++ +A T E
Sbjct: 512 TPSPNPSQSTSSLESSTSGATTSSGSAGTTMT-SPSQSSSVGSSQGSTSPAASTTSGEMT 570
Query: 85 SQFSLKSVAESVTEAA 38
SQ S ++ SV+ +A
Sbjct: 571 SQGSTQTPGSSVSTSA 586
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = -3
Query: 265 TPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTSSLAYISTPFHGSTLSAFETPNEFA 86
TP NPS S+ S S + +AG S S + + + ++ +A T E
Sbjct: 719 TPSPNPSQSTSSLESSTSGATTSSGSAGTTMT-SPSQSSSVGSSQGSTSPAASTTSGEMT 777
Query: 85 SQFSLKSVAESVTEAA 38
SQ S ++ SV+ +A
Sbjct: 778 SQGSTQTPGSSVSTSA 793
>U53180-4|AAA96286.2| 558|Caenorhabditis elegans Suppressor of
presenilin defectprotein 1 protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 394 ISEN-GRAEESGLVHQDSVPSI-APSQSNNQLKPNMSKRKLSYSKTPKAN 251
I EN EE+ L+ +DS+ + +P S + KP+ SKRK S + +++
Sbjct: 37 IEENVPEVEENTLLEEDSLVDVDSPRPSQQRSKPSKSKRKRKRSSSGESS 86
>U28732-8|AAB04898.1| 92|Caenorhabditis elegans Hypothetical
protein F45E1.1 protein.
Length = 92
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 289 KRKLSYSKTPKANPSTSSFSRHGSQETFSR 200
KRK + +TP+A+PS + S+H E R
Sbjct: 29 KRKAAEPRTPRASPSREAISKHLKDEARQR 58
>AY160228-1|AAN62581.1| 558|Caenorhabditis elegans suppressor of
presenilin 1 protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 394 ISEN-GRAEESGLVHQDSVPSI-APSQSNNQLKPNMSKRKLSYSKTPKAN 251
I EN EE+ L+ +DS+ + +P S + KP+ SKRK S + +++
Sbjct: 37 IEENVPEVEENTLLEEDSLVDVDSPRPSQQRSKPSKSKRKRKRSSSGESS 86
>AF548624-1|AAN59932.1| 558|Caenorhabditis elegans suppressor of
presenilin defect protein.
Length = 558
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = -3
Query: 394 ISEN-GRAEESGLVHQDSVPSI-APSQSNNQLKPNMSKRKLSYSKTPKAN 251
I EN EE+ L+ +DS+ + +P S + KP+ SKRK S + +++
Sbjct: 37 IEENVPEVEENTLLEEDSLVDVDSPRPSQQRSKPSKSKRKRKRSSSGESS 86
>AF016430-4|AAB65372.1| 594|Caenorhabditis elegans Hypothetical
protein C05C8.5 protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 331 APSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQETFSRRQSNAGPIRNYSTSSL 152
+P Q+ ++ + +R+L+ S+ P +PSTS S S+ R S G +L
Sbjct: 20 SPEQAEHEFQCATKRRRLTSSEKPTKSPSTS--SDDPSKPKLELRLSRLGDGHRLDCETL 77
Query: 151 A-YISTPFHGSTL 116
A +I GS+L
Sbjct: 78 AQFIHFSIFGSSL 90
>Z70750-4|CAA94739.2| 187|Caenorhabditis elegans Hypothetical
protein C50F4.4 protein.
Length = 187
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 568 MLNVWAAALLFQPVEEHMVRKYKENQEEDCPQDALL 461
+LNVW A+ FQP E + +EN D +L
Sbjct: 63 LLNVWKYAIYFQPKSEVFIDTLQENGYPDAVVKGIL 98
>Z50794-8|CAA90655.2| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = -3
Query: 763 VGTGXGXAFPATVXIVTSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLETYGYKG 593
+G G G + + I YF + R G G ILP L++++ Y G
Sbjct: 137 MGIGCGLMRNSIISIQCEYFKKKRNTVMAAISIGPGLGIFILPRTLKFIMVKYNSWG 193
>Z49937-9|CAO78727.1| 450|Caenorhabditis elegans Hypothetical
protein F59F5.1 protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = -3
Query: 763 VGTGXGXAFPATVXIVTSYFVRFRGLANGICMSGSAFGSIILPPVLRYLLETYGYKG 593
+G G G + + I YF + R G G ILP L++++ Y G
Sbjct: 137 MGIGCGLMRNSIISIQCEYFKKKRNTVMAAISIGPGLGIFILPRTLKFIMVKYNSWG 193
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Frame = -3
Query: 487 EDCPQDALLXXXXXXXE-IDVIEMSQTNDKKGISENGRAEESGLVHQDSVPSI----APS 323
E+CP+ +L D +E++ T D+ + E V+Q + I +PS
Sbjct: 14957 EECPETSLYKVERKKVGDSDWLEIANT-DRNKFKDRSLTESGEYVYQVTATGIHAVSSPS 15015
Query: 322 QSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQE 212
+ N +K + ++ SKT K + S S S E
Sbjct: 15016 EETNPVKILVPGSEMPASKTEKKTDAAKSESEQKSAE 15052
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Frame = -3
Query: 487 EDCPQDALLXXXXXXXE-IDVIEMSQTNDKKGISENGRAEESGLVHQDSVPSI----APS 323
E+CP+ +L D +E++ T D+ + E V+Q + I +PS
Sbjct: 14957 EECPETSLYKVERKKVGDSDWLEIANT-DRNKFKDRSLTESGEYVYQVTATGIHAVSSPS 15015
Query: 322 QSNNQLKPNMSKRKLSYSKTPKANPSTSSFSRHGSQE 212
+ N +K + ++ SKT K + S S S E
Sbjct: 15016 EETNPVKILVPGSEMPASKTEKKTDAAKSESEQKSAE 15052
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 294 IFGFSWLFDWDGAMLGTLSWWTSPLSSALPFSDMPFLSFV 413
+F +W+ DW G+ +G W + + S + ++SF+
Sbjct: 24 VFSIAWVTDWSGS-IGLFPLWDITIGWYIAASSLMYVSFL 62
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +3
Query: 294 IFGFSWLFDWDGAMLGTLSWWTSPLSSALPFSDMPFLSFV 413
+F +W+ DW G+ +G W + + S + ++SF+
Sbjct: 24 VFSIAWVTDWSGS-IGLFPLWDITIGWYIAASSLMYVSFL 62
>AF039713-13|AAB96719.2| 690|Caenorhabditis elegans Hypothetical
protein F57B10.1 protein.
Length = 690
Score = 27.9 bits (59), Expect = 8.8
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 4/139 (2%)
Frame = -3
Query: 577 GGIMLNVWAAALLFQPVEEHMVRKYKENQEEDCPQDALLXXXXXXXEI-DVIEMSQTNDK 401
G +++ + + + Q E ++ K++ E C LL + +Q +
Sbjct: 118 GEDLMDCYPSIDILQQASEELLYS-KDDDYEICSSGPLLAYTNANSVATSAVHQNQQQQQ 176
Query: 400 KGISENG--RAEESGLVH-QDSVPSIAPSQSNNQLKPNMSKRKLSYSKTPKANPSTSSFS 230
+ +++ G +GLV + S P + S + P+ S S S TP + S+SS +
Sbjct: 177 RRLNQAGFPHQNSNGLVRFKSSQPRVLNPASISLNAPSSSFNPQSTSSTPATSSSSSSST 236
Query: 229 RHGSQETFSRRQSNAGPIR 173
G ++ + + P+R
Sbjct: 237 NGGFVKSSTGERRKYPPLR 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,028,770
Number of Sequences: 27780
Number of extensions: 328991
Number of successful extensions: 1389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -